Sequence details NCBI ID: XM_004854335.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nr3c1
Gene Name nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor), transcript variant X9
Entrez Gene ID 101722101

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NR3C1 ENSCPOG00000005188 (Guinea pig)

Gene Details

nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014391, Guinea pig)

Protein Percentage 91.17%
CDS Percentage 92.94%
Ka/Ks Ratio 0.31664 (Ka = 0.0493, Ks = 0.1556)

NR3C1 ENSG00000113580 (Human)

Gene Details

nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)

External Links

Gene Match (Ensembl Protein ID: ENSP00000231509, Human)

Protein Percentage 92.62%
CDS Percentage 91.97%
Ka/Ks Ratio 0.1553 (Ka = 0.0379, Ks = 0.2441)

Nr3c1 ENSMUSG00000024431 (Mouse)

Gene Details

nuclear receptor subfamily 3, group C, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111229, Mouse)

Protein Percentage 88.99%
CDS Percentage 88.39%
Ka/Ks Ratio 0.16333 (Ka = 0.0598, Ks = 0.3662)

NR3C1 ENSRNOG00000048800 (Rat)

Gene Details

Glucocorticoid receptor

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019409, Rat)

Protein Percentage 84.04%
CDS Percentage 85.95%
Ka/Ks Ratio 0.23896 (Ka = 0.0923, Ks = 0.3864)

Genome Location

Sequence Coding sequence

Length: 2322 bp    Location: 2603423..2496276   Strand: -
Raw sequence   
>XM_004854335.1
ATGGACTCCAAAGAATCATTAACCCCACCTAGTAGAGAAGAAGTCCCCAGCAGTGCACTTGGTTCAGAGAGGCGGAATGTGATTGATTTCTATAAAACCCTAAGGGGAGGAGCTACTGTGAAGGTTTCTGCATCTTCTCCCTCACTGGCTGCTGCTTCTCAGTCAGATTCCAAGCAGCGAAGACTTTTGGTTGATTTTCCAAAAGGCTCAGGAAGCAATGCACAGCAGCCAGATCTGTCAAAAGCTGTTTCACTCTCAATGGGACTGTATATGGGAGAGACAGACACAAAAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCTGGAGAAACAGACTTTCAGCTCCTGGAAGAAAGTATTGCAAACCTCAGTAGGTCGACTAGTATTCCAGAAAACTCCAAGAGTTCAGCATCTGCTGTGGCTGGAACCCCCACAGAGGAGTTTCCCAAAACTGAGTCTGATATATCTTCAGAACAGCAAAACCTAGAGGGTCAGACTGGCACCAATGGTGGCAATGTGAAGTCGTATCCCACAGACCAAAGCACCTTTGACATCTTGCAAGATTTGGAGTTTTCTTCTGGGTCACCAAGTAAAGAGACGAATGAGAGTCCTTGGAGATCTGACCTGTTGATGGACGAAAACTGTTTGCTTTCTCCTTTGGGAGGAGAGGACGATCCATTCCTTTTGGAAGGGAACTCGAATGAAGACTGCAAGCCTCTTATTTTACCGGACACTAAACCTAAAATTAAGGATAATGGAGATGTGATCTTATCAAGTCCCAACAGTGTACCACTGCCCCAAGTGAAAACAGAAAAAGAAGACTTCATTGAACTCTGCACCCCTGGGGTAATTAAGCAGGAGAAACTGGGCCCAGTTTATTGTCAGGCAAGCTTTTCTGGGGCAAATATAATAGGTAATAAAATGTCTGCCATTTCTATACATGGTGTGAGTACCTCTGGAGGACAGATGTACCACTATGACATGAATACAGCATCCCTTTCTCAGCAACAGGATCAGAAGCCTATTTTTAATGTCATTCCACCAATTCCTGTTGGTTCAGAAAATTGGAATAGGTGCCAAGGATCTGGAGATGACAACCTGAGTTCCTTGGGGACTGTGAACTTCCCTGGTCGATCAGTTTTTTCTAACGGCTTTTCAAGCCCTGGAATGAGGCCAGATGTAAGCTCTCCTCCATCTAGTTCCTCAACAACAGGACCACCTCCCAAACTCTGCCTGGTGTGCTCTGATGAAGCCTCGGGATGTCATTATGGGGTCTTGACATGTGGAAGCTGTAAAGTATTCTTCAAAAGAGCAGTGGAAGGACAGCACAATTATCTTTGTGCTGGAAGAAATGATTGCATCATTGATAAAATTCGGAGAAAAAACTGCCCAGCCTGTCGCTATCGAAAATGTCTTCAAGCTGGAATGAACCTGGAAGCTCGAAAAACAAAGAAAAAAATTAAAGGAATTCAGCAAGCCACTACAGGAGTCTCACAAGACACTTCTGAAAATCCTAACAAAACAATAGTTCCTGCAACATTACCACAACTCACCCCTACGCTGGTGTCACTCTTGGAAGTCATTGAACCTGAGGTGTTATATGCAGGATATGACGGCACTGTTCCAGACACAACCTGGAGGATCATGACCACACTCAACATGTTAGGTGGACGCCAAGTGATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGATTCAGGAACTTACACCTAGACGACCAAATGACCCTTCTGCAGTACTCATGGATGTTTCTCATGGCATTTGCCCTGGGGTGGAGATCATACAGACAATCAAGTGGAAATGTGCTGTGTTTTGCTCCTGATCTGATTATTAATGAGCAGAGAATGGGTCTACCCTACATGTATGACCAATGTAAACAGATGCTATTTGTTTCCTCTGAGTTAAAAAGGCTTCAGGTATCTTATGAAGAGTACCTCTGTATGAAAACCTTACTTCTTTTCTCTTCAGTTCCTAAGGAAGGTTTGAAGAGCCAAGAGCTATTTGATGAAATTAGAATGACCTACATCAAAGAGCTAGGAAAAGCCATTGTCAAAAGAGAAGGAAACTCCAGCCAGAACTGGCAGAGGTTTTATCAGCTGACAAAACTTTTGGACTCCATGCATGAAATAGTTGGAAATCTCCTTAACTATTGCTTCCAAACATTTTTGGATAAGACTATGAGTATTGAATTCCCTGAGATGTTAGCTGAAATCATCACCAATCAAATACCAAAATATTCAAATGGAAATATCAAAAAACTTCTATTTCATCAAAAGTGA

Related Sequences

XP_004854392.1 Protein

Nr3c1 PREDICTED: glucocorticoid receptor isoform X9 [Heterocephalus glaber]

Length: 773 aa      View alignments
>XP_004854392.1
MDSKESLTPPSREEVPSSALGSERRNVIDFYKTLRGGATVKVSASSPSLAAASQSDSKQRRLLVDFPKGSGSNAQQPDLSKAVSLSMGLYMGETDTKVMGNDLGFPQQGQISLSSGETDFQLLEESIANLSRSTSIPENSKSSASAVAGTPTEEFPKTESDISSEQQNLEGQTGTNGGNVKSYPTDQSTFDILQDLEFSSGSPSKETNESPWRSDLLMDENCLLSPLGGEDDPFLLEGNSNEDCKPLILPDTKPKIKDNGDVILSSPNSVPLPQVKTEKEDFIELCTPGVIKQEKLGPVYCQASFSGANIIGNKMSAISIHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVGSENWNRCQGSGDDNLSSLGTVNFPGRSVFSNGFSSPGMRPDVSSPPSSSSTTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQDTSENPNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDGTVPDTTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSGNVLCFAPDLIINEQRMGLPYMYDQCKQMLFVSSELKRLQVSYEEYLCMKTLLLFSSVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEIVGNLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK