Details from NCBI annotation

Gene Symbol Astn1
Gene Name astrotactin 1, transcript variant X2
Entrez Gene ID 101714649

Database interlinks

Part of NW_004624771.1 (Scaffold)

For more information consult the page for NW_004624771.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ASTN1 ENSCPOG00000011919 (Guinea pig)

Gene Details

astrotactin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010723, Guinea pig)

Protein Percentage 98.68%
CDS Percentage 94.6%
Ka/Ks Ratio 0.02524 (Ka = 0.0059, Ks = 0.2354)

ASTN1 ENSG00000152092 (Human)

Gene Details

astrotactin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000354536, Human)

Protein Percentage 97.37%
CDS Percentage 91.71%
Ka/Ks Ratio 0.03007 (Ka = 0.0119, Ks = 0.3959)

Astn1 ENSMUSG00000026587 (Mouse)

Gene Details

astrotactin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039711, Mouse)

Protein Percentage 97.37%
CDS Percentage 89.93%
Ka/Ks Ratio 0.02435 (Ka = 0.0121, Ks = 0.4969)

Astn1 ENSRNOG00000005667 (Rat)

Gene Details

astrotactin 1 precursor

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007660, Rat)

Protein Percentage 95.89%
CDS Percentage 89.54%
Ka/Ks Ratio 0.04164 (Ka = 0.0204, Ks = 0.4888)

Genome Location

Sequence Coding sequence

Length: 3885 bp    Location: 5027442..5315460   Strand: +
>XM_004853389.1
ATGGCTTTAGCCCGGCTCTGCGCCCTGCTCGCCTGCTGCTGGGCCCCGGCGGCGGTGCTGGCCACGGCCGGCGGGGACGTGGATGCGACCAAGGAGCTGGAGTGCAAGCTCAAGAGCATCACCGTGTCGGCGCTGCCCTTTCTGCGCGAGAACGACCTGAGCATCATGCACAGTCCCTCGGCCTCCGAACCCAAGCTCCTCTTCTCCGTGCGCAACGACTTCCCGGGAGAAATGGTCGTGGTGGACGACCTGGAGAACACAGAGCTGCCCTACTTCGTGCTGGAGATCTCAGGGAACACAGAGGACATCCCTCTGGTGCGTTGGAGGCAGCAGTGGCTGGAGAATGGCACTTTACTTTTTCACATCCACCACCAAGATGGTGCCCCAAGTCTCCCTGGACAAGACCCAACTGAAGAACCCCAGCATGAGTCAGCAGAAGAGGAGCTGAGGATCCTCCACATCTCAGTCATGGGTGGCATGATTGCTCTGTTGCTGTCCATCTTGTGCCTGGTAATGATCCTGTACACACGCCGGCGGTGGTGCAAACGCCGCCGGGTCCCCCAGCCCCAGAAGAGTGCCAGTGCCGAGGCAGCCAATGAGATTCACTACATTCCTTCTGTGCTGATCGGTGGCCATGGGCGAGAGAGTCTGCGCAATGCTCGTGTGCAGGGCCACAACTCTAGTGGGACCCTGAGCATCCGGGAGACACCCATCCTGGATGGGTATGAATATGACATCACAGACCTGCGCCACCATCTACAGAGGGAGTGCATGAACGGAGGCGAAGATTTTGCCAGCCAGGTCACTCGAACCCTGGACTCCTTGCAGGGCTGCAATGAGAAGGCAGGGATGGACCTCACGCCAGGAAGTGACAATGCCAAGCTCTCACTGATGAACAAATATAAAGATAACATCATTGCCACCAGTCCTGTGGACTCCAACCACCAGCAGGCCACTCTGCTCTCCCACACCTCCAGTAGCCAGAGAAAGCGAATCAACAACAAAGCCAGAGCTGGTTCAGCCTTCTTGAACCCTGAAGGGGACTCTGGCACAGAGGCAGAAAATGACCCTCAGCTGACCTTTTACACGGATCCCTCTCGCAGCCGGAGGCGCAGCCGAGTCGGTTCTCCCAGAAGTCCTGTGAATAAGACCACCTTGACTTTAATCAGCATTACCAGCTGTGTCATTGGCCTTGTGTGCTCCTCTCATGTCAGCTGTCCTCTCGTTGTCAAAATAACCCTGCATGTCCCCGAGCACCTGATCGCTGATGGGAGCCGCTTCATCCTGCTGGAGGGGAGCCAGCTGGATGCCAGTGACTGGCTGAACCCTGCCCAAGTGGTTCTCTTCTCTCAACAGAACTCCAGTGGGCCCTGGGCCATGGACCTCTGTGCCCGGCGGCTCTTGGACCCCTGTGAACACCAATGTGACCCCGAAACTGGGGAATGCCTCTGCTATGAAGGTTACATGAAGGATCCAGTCCACAAGCACCTTTGCATTCGGAATGAATGGGGGACAAACCAGGGGCCTTGGCCTTACACAATATTTCAGCGAGGCTTTGACCTGGTTCTGGGAGAGCAACCCTCTGATAAAATATTCAGATTTACCTACACCCTTGGGGAGGGCATGTGGTTGCCCCTCAGCAAGAGCTTCGTGATTCCACCAGCTGAACTGGCCATCAACCCGTCCGCAAAGTGTAAGACAGACATGACTGTGATGGAGGATGCTGTGGAGGTCCGAGAGGAGCTGATGACGTCCTCCTCCTTTGACAGCCTGGAGGTTCTCTTGGATTCCTTTGGGCCAGTCCGGGACTGCAGCAAAGATAATGGGGGCTGCAGTAAGAATTTTCGCTGCATTTCAGATCGCAAGCTGGACTCCACTGGCTGTGTGTGCCCGTCTGGACTCAGTCCCATGAAGGACAGCTCTGGCTGCTACGACCGGCACGTCGGCGTGGACTGCTCAGACGGCTTCAACGGTGGCTGCGAGCAGCTGTGTCTCCAGCAGACGGCGCCCTTCCCGGATGACCCCGCCTTGTACAACATCCTCATGTTCTGCGGGTGCATTGAGGATTACAAGCTTGGTGTGGATGGACGTTCCTGCCAACTCGTCACAGAGACCTGCCCCGAGGGAGGCGATTGTGGGGAGAGCAGGGAGCTTCCCATGAACCAGACTCTCTTTGGGGAGATGTTCTTCGGTTACAACAACCAGTCCAAGGAAGTGGCCCCTGGACAGGTGCTGAGAGGAACATACAGGCAAAACAACTTTGCCCGTGGCTTAGACCAGCAGCTGCCAGATGGTCTTGTGGTGGCCACGGTCCCCCTGGAGAATCAGTGCCTGGAAGAAATCTCGGAGCCCACCCCAGACCCCGACTTCCTCACTGGGATGGTGAACTTCAGTGAAGTGTCTGGTTACCCCGTACTGCAGCACTGGAAGGTGCAGTCTGTGATGTACCACATCAAACTCAGCCAGGCAGCTGTCTCTCAGGCTTTCAGCAATGCTCTTCATTCCCTGGATGGGGCTACATCCCGTGCAGATTTTGTGGCCTTATTGGATCAGTTTGGCAATCATTACATCCAGGAAGCTATCTATGGCTTTGAAGAGTCCTGTTCTATCTGGTACCCAAACAAGCAAGTCCAGCGGCGACTCTGGATGGAATATGAAGATATCAGTAAAGGCAACTCCCCATCGGATGAGTCAGAGGAGCGGGAGAGAGACCCCAAGGTGCTGACATTCCCAGAATACATTGCAAGCCTGTCAGACTCTGGTACCAAGCGCATGGCAGCTGGAGTCCGCATGGAGTGCCAAAGCAAGGGGCGATGCCCCGCCTCCTGCCCCTTGTGTCATGTGACATCCAGCCCCGACACTCCCGCTGAGCCAGTCCTGCTGGAGGTGACCAGAGCAGCCCCCATCTATGAACTGGTGACTAACAATCAGACCCAGAGGCTCTTGCAGGAGGCCACCATGAGCTCCCTCTGGTGCTCAGGGACTGGAGATGTCATTGAGGACTGGTGTCGATGCGACTCCACCGCTTTTGGAGCTGATGGACTCCCCACCTGTGCACCTCTGCCACAGCCTGTGCTGAGACTCTCCACGGTTCATGAGCCCAGCAGCACCCTTGTGGTCCTGGAGTGGGAGCACTCAGAGCCGCCAATTGGGGTACAGATTGTAGATTACCTCATCCGTCAAGAGAAGGTCACCGACAGGATGGACCACTCCAAAGTGGAGACAGAAACGGTACTGAGCTTTGTGGATGACATCATCTCTGGAGCTAAGTCCCCTTGTGCCATGCCATCTCAGGTGCCAGACAAACAGCTCACCACCATCTCCCTCATCGTAAGATGCCTGGAACCCGACACCATTTACATGTTCACCCTTTGGGGAGTGGATAACACAGGACGACGTTCCAGGCCAAGTGACATGATTGTGAAGACCCCTTGCCCTGTGGTGGATGATGTGAAAGCCCAAGAGATAGCAGATAAGATCTACAATCTTTTCAATGGCTATACAAGTGGGAAGGAACAACAGACTGCCTACAACACCCTCCTGGATCTGGGTTCCCCCACCTTACATCGAGTCCTTTACCACTATAACCAGCACTATGAGAGCTTTGGAGAATTCACATGGAGGTGTGAGGATGAACTAGGCCCCAGGAAAGCTGGCCTCATCCTTTCCCAGCTTGCAGATCTCAGCAGTTGGTGCAATGGACTCCTCCAGGAACCCAAGATAAGCTTGCGGCGCAGTGCCCTCAAGTACCTGGGCTGTCGCTACAGTGAGATCAAGCCCTACGGGCTGGACTGGTCAGAGCTCAGCCGGGACCTCAGGAAGACATGTGAGGAGCAGACCCTGAGCATCCCCTACAACGACTATGGTGACAGCAAAGACATCTAG

Related Sequences

XP_004853446.1 Protein

Astn1 PREDICTED: astrotactin-1 isoform X2 [Heterocephalus glaber]

Length: 1294 aa      View alignments
>XP_004853446.1
MALARLCALLACCWAPAAVLATAGGDVDATKELECKLKSITVSALPFLRENDLSIMHSPSASEPKLLFSVRNDFPGEMVVVDDLENTELPYFVLEISGNTEDIPLVRWRQQWLENGTLLFHIHHQDGAPSLPGQDPTEEPQHESAEEELRILHISVMGGMIALLLSILCLVMILYTRRRWCKRRRVPQPQKSASAEAANEIHYIPSVLIGGHGRESLRNARVQGHNSSGTLSIRETPILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNEKAGMDLTPGSDNAKLSLMNKYKDNIIATSPVDSNHQQATLLSHTSSSQRKRINNKARAGSAFLNPEGDSGTEAENDPQLTFYTDPSRSRRRSRVGSPRSPVNKTTLTLISITSCVIGLVCSSHVSCPLVVKITLHVPEHLIADGSRFILLEGSQLDASDWLNPAQVVLFSQQNSSGPWAMDLCARRLLDPCEHQCDPETGECLCYEGYMKDPVHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFGPVRDCSKDNGGCSKNFRCISDRKLDSTGCVCPSGLSPMKDSSGCYDRHVGVDCSDGFNGGCEQLCLQQTAPFPDDPALYNILMFCGCIEDYKLGVDGRSCQLVTETCPEGGDCGESRELPMNQTLFGEMFFGYNNQSKEVAPGQVLRGTYRQNNFARGLDQQLPDGLVVATVPLENQCLEEISEPTPDPDFLTGMVNFSEVSGYPVLQHWKVQSVMYHIKLSQAAVSQAFSNALHSLDGATSRADFVALLDQFGNHYIQEAIYGFEESCSIWYPNKQVQRRLWMEYEDISKGNSPSDESEERERDPKVLTFPEYIASLSDSGTKRMAAGVRMECQSKGRCPASCPLCHVTSSPDTPAEPVLLEVTRAAPIYELVTNNQTQRLLQEATMSSLWCSGTGDVIEDWCRCDSTAFGADGLPTCAPLPQPVLRLSTVHEPSSTLVVLEWEHSEPPIGVQIVDYLIRQEKVTDRMDHSKVETETVLSFVDDIISGAKSPCAMPSQVPDKQLTTISLIVRCLEPDTIYMFTLWGVDNTGRRSRPSDMIVKTPCPVVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLLDLGSPTLHRVLYHYNQHYESFGEFTWRCEDELGPRKAGLILSQLADLSSWCNGLLQEPKISLRRSALKYLGCRYSEIKPYGLDWSELSRDLRKTCEEQTLSIPYNDYGDSKDI