Sequence details NCBI ID: XM_004853138.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psma8
Gene Name proteasome (prosome, macropain) subunit, alpha type, 8, transcript variant X1
Entrez Gene ID 101703620

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMA8 ENSCPOG00000012268 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 8

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011033, Guinea pig)

Protein Percentage 94.78%
CDS Percentage 94.38%
Ka/Ks Ratio 0.13089 (Ka = 0.0241, Ks = 0.1841)

PSMA8 ENSG00000154611 (Human)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 8

External Links

Gene Match (Ensembl Protein ID: ENSP00000311121, Human)

Protein Percentage 93.6%
CDS Percentage 92.13%
Ka/Ks Ratio 0.10879 (Ka = 0.0317, Ks = 0.2918)

Psma8 ENSMUSG00000036743 (Mouse)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 8

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042590, Mouse)

Protein Percentage 92.0%
CDS Percentage 87.73%
Ka/Ks Ratio 0.07637 (Ka = 0.0418, Ks = 0.5474)

Psma8 ENSRNOG00000030363 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 8 (Psma8), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042447, Rat)

Protein Percentage 92.8%
CDS Percentage 87.47%
Ka/Ks Ratio 0.05995 (Ka = 0.0364, Ks = 0.6075)

Genome Location

Sequence Coding sequence

Length: 753 bp    Location: 6235785..6185767   Strand: -
Raw sequence   
>XM_004853138.1
ATGGCTTCTCGGTACGATAGGGCAATCACTGTATTTTCCCCAGACGGACACCTTTTCCAAGTGGAATATGCTCAGGAAGCGGTGAAGAAGGGATCCACAGTGGTTGGAATTCGAGGAACCAATATAGTTGTGCTTGGGGTAGAAAAAAAATCTGTTGCCAAGCTTCAAGATGAAAGAACTGTGAGGAAAATTTGTGCTCTTGATGACCACGTTTGCATGGCTTTTGCAGGACTGACTGCTGATGCTAGAGTCATAATAAACAGAGCCCAGGTGGAGTGTCAGAGCCATAAGCTTACAGTTGAGGATTCAGTCACCATAGAATACATAACTCGCTTCATAGCAACTTTAAAGCAGAAATACACCCAGAGCAACGGACGAAGACCTTTTGGTATTTCTGCCTTAATTGTAGGTTTTGATGATGATGGTATCCCAAGATTATATCAGACAGATCCCTCTGGTACTTATCATGCTTGGAAAGCAAATGCAATAGGCCGAAGTGCTAAAACTGTTCGAGAATTTCTAGAAAAGAATTACTCCGAAGATGCTGTATCAAATGACAGTGAAGCTATCAAATTAGCAATAAGAGCATTACTAGAAGTTGTCCAGTCTGGAGGAAAGAACATTGAACTAGCTATAATAAGAAGAAACCAACCTTTGAAGATGTTTAGTGCCAAAGAAATTAAATTACAAGTAACTGAATTAGAAAAGGAAAAGGAAGAAGCAGAGAAGAAAAAATCAAAGAAGACTGTCTAA

Related Sequences

XP_004853195.1 Protein

Psma8 PREDICTED: proteasome subunit alpha type-7-like isoform X1 [Heterocephalus glaber]

Length: 250 aa      View alignments
>XP_004853195.1
MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTVVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVIINRAQVECQSHKLTVEDSVTIEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYSEDAVSNDSEAIKLAIRALLEVVQSGGKNIELAIIRRNQPLKMFSAKEIKLQVTELEKEKEEAEKKKSKKTV