Sequence details NCBI ID: XM_004853132.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cdh2
Gene Name cadherin 2, type 1, N-cadherin (neuronal)
Entrez Gene ID 101700672

Database interlinks

Part of NW_004624770.1 (Scaffold)

For more information consult the page for NW_004624770.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDH2 ENSCPOG00000012391 (Guinea pig)

Gene Details

cadherin 2, type 1, N-cadherin (neuronal)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011148, Guinea pig)

Protein Percentage 98.79%
CDS Percentage 94.26%
Ka/Ks Ratio 0.02408 (Ka = 0.0056, Ks = 0.2343)

CDH2 ENSG00000170558 (Human)

Gene Details

cadherin 2, type 1, N-cadherin (neuronal)

External Links

Gene Match (Ensembl Protein ID: ENSP00000269141, Human)

Protein Percentage 97.79%
CDS Percentage 92.9%
Ka/Ks Ratio 0.03764 (Ka = 0.0112, Ks = 0.2972)

Cdh2 ENSMUSG00000024304 (Mouse)

Gene Details

cadherin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025166, Mouse)

Protein Percentage 96.58%
CDS Percentage 88.23%
Ka/Ks Ratio 0.03036 (Ka = 0.0173, Ks = 0.5686)

Cdh2 ENSRNOG00000015602 (Rat)

Gene Details

cadherin 2 (Cdh2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021170, Rat)

Protein Percentage 96.36%
CDS Percentage 87.45%
Ka/Ks Ratio 0.02879 (Ka = 0.0183, Ks = 0.6346)

Genome Location

Sequence Coding sequence

Length: 2721 bp    Location: 4333947..4542027   Strand: +
Raw sequence   
>XM_004853132.1
ATGTGCCGGATAGCGGGAGCGCCGCGGACCCTGCTGCCGCTCCTGGCGGCCCTGCTCCAGGCATCTGTAGAGGCTTCTGGTGAAATCGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGTGCCGTCTTATCGAAGGATGTGCATGAAGGACAGCCTCTTCTCAATGTGAACTTTAGCAACTGCAATGGAAAGAGAAAAGTACAGTATGAAAGCAGTGAGCCAGCAGACTTCAAGGTGGATGAGGACGGCATGGTATATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCAAAGTTCCTGATCTTTGCCCAGGACAAGGAGACTCAGGAAAAATGGCAAGTGGCAGTGAAGCTGAGCCTTAAACCAACCTTAACTGAGGAGTCAGCAAAGGAATCACATGAAATTGCAGAAATAGTGTTCCCAAGACAATCCACCAAGCACAGCAGCTCCCTGCAGAGGCAGAAGAGAGACTGGGTCATCCCTCCAATCAACTTGCCAGAAAACTCCAGAGGACCTTTTCCTCAGGAGCTCGTCAGGATCAGGTCTGATAGGGATAAAAACCTCTCGCTTCGGTACAGCGTCACTGGGCCAGGAGCTGACCAGCCTCCGACCGGCATCTTCATTATCAACCCCATCTCGGGTCAGCTGTCAGTGACCAAGCCCCTGGATCGCGAGCTGATAGCCCGGTTTCATTTGAGGGCACATGCAGTAGATATTAATGGCAATCAGGTGGAGAACCCAATTGACATTGTCATCAATGTTATTGACATGAATGATAATAGACCTGAGTTCTTACACCAGGTCTGGAATGGGACTGTTCCTGAGGGATCGAAGCCTGGAACGTATGTGATGACCGTAACTGCTATTGATGCTGATGACCCGAATGCCCTAAATGGAATGTTGAGGTACAGAATCCTGTCCCAGGCTCCGAGCACCCCTTCACCCAACATGTTTACAATCAACAATGAGACTGGAGACATCATCACAGTGGCAGCTGGACTTGATCGAGAAAAAGTGCAACAGTATACGTTAATAATTCAAGCTACCGACATGGAAGGCAATCCCACGTACGGCCTCTCCAACACAGCCACGGCTGTCATCACGGTGACAGATGTCAATGACAATCCTCCCGAGTTTACTGCCATGACGTTCTACGGTGAAGTCCCTGAGAATAGGGTGGATGTCATAGTGGCGAATCTAACGGTGACAGATAAGGATCAGCCCCATACACCAGCCTGGAACGCCGTGTACAGAATCAGCGGTGGAGACCCTACAGGAAGGTTTGCCATTCAGACTGATCCCAACAGCAACGACGGGTTAGTCACGGTGGTAAAACCCATCGACTTTGAAACAAATAGGATGTTTGTCCTCACTGTAGCTGCAGAAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACCCGCCTCAGTCAACCGCAACTGTGTCTGTTACAGTTATTGATGTGAATGAAAACCCTTATTTTGCCCCCAATCCTAAAATTATTCGCCAGGAAGAAGGCCTTCATGCAGGTACCATGTTGACAGCCTTCACTGCTCAGGACCCGGATCGATATATGCAGCAAAATATTAGATATACAAAATTATCTGATCCTGCCAATTGGCTAAAAATAGATCCTGTGAATGGGCAAATCACTACAATTGCTGTTTTGGACAGAGAATCACCAAATGTGAAAAACAATGTATATAATGCTACTTTCCTTGCTTCTGACAATGGAATTCCTCCTATGAGTGGAACTGGAACGCTGCAGATCTATTTACTTGATATTAATGACAACGCCCCTCAAGTGTTACCTCAAGAGGCAGAGACTTGTGAAACACCAGACCCCAATTCAATTAACATCACAGCACTTGATTATGACATTGATCCAAACGCTGGACCATTTGCTTTTGATCTTCCTTTATCTCCAGTAACAATTAAGAGAAATTGGACCATCACTCGGCTTAACGGTGATTTTGCTCAGCTTCATTTAAAGATAAAATTTCTTGAAGCTGGTATCTATGAAGTTCCCATCATCATCACAGATTCGGGTAACCCTCCCAAGTCCAATATTTCCGTCCTCCGAGTGAAGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGATGTGGACAGGATCGTGGGCGCAGGGCTTGGCACGGGCGCAATCATAGCTATCCTACTCTGCATCATCATTCTGCTCCTCCTTGTCCTGATGTTTGTGGTATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATCGATCCCGAAGATGATGTAAGAGATAATATTTTAAAATATGACGAAGAAGGTGGAGGAGAAGAAGACCAGGACTATGACTTGAGCCAGCTCCAGCAGCCTGATACCGTGGAGCCCGATGCGATCAAGCCTGTAGGAATCCGGCGGCTGGATGAGAGACCCATTCACGCTGAGCCGCAGTATCCAGTCCGATCTGCAGCCCCACATCCTGGGGACATTGGGGACTTCATTAATGAGGGCCTTAAAGCTGCTGACAATGACCCCACAGCTCCGCCATATGACTCCCTCTTAGTCTTCGACTACGAAGGCAGTGGCTCCACAGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGGTGGGGAGCAGGACTATGATTACCTGAACGACTGGGGGCCACGGTTCAAGAAGCTTGCTGACATGTATGGTGGAGGTGATGACTGA

Related Sequences

XP_004853189.1 Protein

Cdh2 PREDICTED: cadherin-2 [Heterocephalus glaber]

Length: 906 aa      View alignments
>XP_004853189.1
MCRIAGAPRTLLPLLAALLQASVEASGEIALCKTGFPEDVYSAVLSKDVHEGQPLLNVNFSNCNGKRKVQYESSEPADFKVDEDGMVYAVRSFPLSSEHAKFLIFAQDKETQEKWQVAVKLSLKPTLTEESAKESHEIAEIVFPRQSTKHSSSLQRQKRDWVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGTVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIVANLTVTDKDQPHTPAWNAVYRISGGDPTGRFAIQTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYFAPNPKIIRQEEGLHAGTMLTAFTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNVYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEAETCETPDPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTITRLNGDFAQLHLKIKFLEAGIYEVPIIITDSGNPPKSNISVLRVKVCQCDSNGDCTDVDRIVGAGLGTGAIIAILLCIIILLLLVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTVEPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGEQDYDYLNDWGPRFKKLADMYGGGDD