Sequence details NCBI ID: XM_004852835.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc28a1
Gene Name solute carrier family 28 (sodium-coupled nucleoside transporter), member 1, transcript variant X2
Entrez Gene ID 101724912

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC28A1 ENSCPOG00000008594 (Guinea pig)

Gene Details

solute carrier family 28 (concentrative nucleoside transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007723, Guinea pig)

Protein Percentage 85.92%
CDS Percentage 88.0%
Ka/Ks Ratio 0.2283 (Ka = 0.0784, Ks = 0.3433)

SLC28A1 ENSG00000156222 (Human)

Gene Details

solute carrier family 28 (concentrative nucleoside transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000378074, Human)

Protein Percentage 79.53%
CDS Percentage 80.83%
Ka/Ks Ratio 0.17313 (Ka = 0.126, Ks = 0.7276)

Slc28a1 ENSMUSG00000025726 (Mouse)

Gene Details

solute carrier family 28 (sodium-coupled nucleoside transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112421, Mouse)

Protein Percentage 77.66%
CDS Percentage 78.7%
Ka/Ks Ratio 0.17443 (Ka = 0.1433, Ks = 0.8217)

Slc28a1 ENSRNOG00000018940 (Rat)

Gene Details

solute carrier family 28 (concentrative nucleoside transporter), member 1 (Slc28a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025621, Rat)

Protein Percentage 77.66%
CDS Percentage 79.06%
Ka/Ks Ratio 0.17752 (Ka = 0.1402, Ks = 0.7897)

Genome Location

Sequence Coding sequence

Length: 1995 bp    Location: 18119626..18158512   Strand: +
Raw sequence   
>XM_004852835.1
ATGGAGGATGACATGCGGGGACAAAGAGAGTCCATCTCCCTCACACCCACGGCCCTCGGTGTGGAGAATGCAGGGGCTGAGTTCTTGGAAAGCCTGGAGGAAGGCCGGCTCCCTGGTAGCAGCGACTCAAGCCCCCACCAAGGCGGGCACACTGTGGAGAGGAAGCGCCTGTGGGGATGGAGAAGCCTGCACCGGGCCCTGCCAGGAAGACCTAGTGCACTCCTCCGATGGATGGGCACAGGCCTGCTCTGTGCTGCATATGCTGCCTTCTTGCTCGCTGCCTGCCTTCTGGACTTCCAGAGGGCTCTGGCACTTTGCATTGTCACCTGTGTGGTCCTGACCTTCCTGGCCCACAGTCTACTGAAGAGGTGTTTGGGCCCAACGCTGAGTGGGTGTGCGATGCTTCAGGGCAACCCTCGCCTGCACCTCTGGTTTAACCGAGCTCTCGCCCTCACTGCGGTTCTGGGCTTGGCCTTGTGGCTGGCGCTGGATACCTCCCAGCGGCCTGAGCAGCTGGTGTCCTTCGCAGGGATCTGCGTGATCGTCTCTCTCCTCTTTGCCTGCTCAAAGCATCGCCATGCTGTCTCCTGGCAGGCCGTGACCTGGGGCCTCGGGCTCCAGTTTGTGCTTGGACTCTTCGTCATCAGAACAGAACTCGGATTTATCGCATTCCAGTGGCTGGGTGATCAGATCCACATCTTCCTGAGCTACACCACAGCAGGGTCCGCCTTTGTGTTTGGGGAGGCTCTGGTCAAGGATGTCTTCGCCTTTCAGGTTCTGCCCATCATTGTTTTCTTCAGCTGTGTCATGTCAGTGCTCTACTATATGGGTCTGATGCAATGGGTGATCTTGAAGATTTCCTGGCTGATGCAGATCACCATGGGCACCACGGCCACCGAGACCCTGAGTGTGGCAGGAAACATCTTTGTGAGCCAGACCGAGGCCCCCCTACTGATCCGGCCCTACCTGGCAGACATGACACTCTCTGAGGTCCACGTGGTCATGACTGGGGGCTATGCCACCATCGCCGGCAGCCTACTGGGTGCCTACATCTCTTTTGGGATCGACGCCAGCTCACTGATTGCGGCGTCCGTGATGGCCGCCCCGTGTGCCTTGGCCCTGTCCAAGCTGGTCTACCCCGAGGCGGAGGAGTCCAAGTTCCGCAGTGAAGAAGTGCGGCTGAGCTACGGGGTCCCTCTTTTGAAACCTTACCTTGCTGTGTGGGGAATGCCCATGATAGCGGCTCTTGGTCCCAACAACAGAGATGCTCAGAACCTTGTAGAAGCCCTCAGCAGTGGGGCCGCCGCCTCCGTGAAGGTCGTTGCCAACATCGCCACCAACCTGATCGCATTCCTGGCTGTGCTGGCCTTCATCAACGCAGCACTGTCCTGGCTTGGAGCCCTGGTAGACATCCCAGGGCTCAGCTTCCAGCTCATCTGCTCCTATGTCCTTCGGCCAGTGGCCTTCTTGATGGGTGTGCCCTGGGAGGACTGCCCGGTGGTGGCCGAGCTGCTGGGGACCAAGCTCTTCCTGAACGAATTCGTGGCCTACCAGGGGCTTTCCGAGTACAAGCGGCGTCGCCTGGCCGGGGCTGAGGAGTGGGTTGGTGCCAGGAAGCAGTGGATCTCGGTCCGAGCAGAAACCCTCACCACGTTTGCCCTCTGTGGATTTGCCAATGTCAGCTCCATCGGCATCATGCTGGGCGGCCTGACCTCCCTGGTCCCCCATCGGAGAAGTGACTTCGCCAGGCTTGTGCTGCGGGCACTCTTCACTGGCGCCTGTGTGTCCCTCGTCAACGCCTGTGTGGCAGGCATCCTCTATGTACCCAGGGGCCCCAAGTCCGGGTGCGGGGGCCTCCTGAATCACACGCTCAGCAGCAGCAGCTTTGAAGTGTACCAGTGCTGTCGCAGAGCCTTCCAGAGCACCAGCCCAGAGTTGAGCCTAGCCTTGAGGGAAAACTGCTGTCGGTTTTACAACCACACCATCTGTGCCTAG

Related Sequences

XP_004852892.1 Protein

Slc28a1 PREDICTED: sodium/nucleoside cotransporter 1 isoform X2 [Heterocephalus glaber]

Length: 664 aa      View alignments
>XP_004852892.1
MEDDMRGQRESISLTPTALGVENAGAEFLESLEEGRLPGSSDSSPHQGGHTVERKRLWGWRSLHRALPGRPSALLRWMGTGLLCAAYAAFLLAACLLDFQRALALCIVTCVVLTFLAHSLLKRCLGPTLSGCAMLQGNPRLHLWFNRALALTAVLGLALWLALDTSQRPEQLVSFAGICVIVSLLFACSKHRHAVSWQAVTWGLGLQFVLGLFVIRTELGFIAFQWLGDQIHIFLSYTTAGSAFVFGEALVKDVFAFQVLPIIVFFSCVMSVLYYMGLMQWVILKISWLMQITMGTTATETLSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISFGIDASSLIAASVMAAPCALALSKLVYPEAEESKFRSEEVRLSYGVPLLKPYLAVWGMPMIAALGPNNRDAQNLVEALSSGAAASVKVVANIATNLIAFLAVLAFINAALSWLGALVDIPGLSFQLICSYVLRPVAFLMGVPWEDCPVVAELLGTKLFLNEFVAYQGLSEYKRRRLAGAEEWVGARKQWISVRAETLTTFALCGFANVSSIGIMLGGLTSLVPHRRSDFARLVLRALFTGACVSLVNACVAGILYVPRGPKSGCGGLLNHTLSSSSFEVYQCCRRAFQSTSPELSLALRENCCRFYNHTICA