Sequence details NCBI ID: XM_004852671.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vimp
Gene Name VCP-interacting membrane protein
Entrez Gene ID 101699120

Database interlinks

Part of NW_004624768.1 (Scaffold)

For more information consult the page for NW_004624768.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VIMP ENSCPOG00000022558 (Guinea pig)

Gene Details

VCP-interacting membrane protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017370, Guinea pig)

Protein Percentage 94.15%
CDS Percentage 92.2%
Ka/Ks Ratio 0.14727 (Ka = 0.0323, Ks = 0.2194)

Vimp ENSRNOG00000012576 (Rat)

Gene Details

VCP-interacting membrane protein (Vimp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016916, Rat)

Protein Percentage 87.17%
CDS Percentage 84.85%
Ka/Ks Ratio 0.1339 (Ka = 0.0697, Ks = 0.5203)

Genome Location

Sequence Coding sequence

Length: 567 bp    Location: 3539418..3550716   Strand: +
Raw sequence   
>XM_004852671.1
ATGGATCGAGATGGTGAGCTGCTGTCCGCGCGGCCGGCCCTGGAGACGGAGGGGCTCCGCTTCTTGCACGTCACGGTGGGCTCGCTGCTGGCCACCTATGGCTGGTACATCCTCTTCAGCTGTATCCTCCTCTACGTGGTCTTTCAGAAGCTTTACATCCGGCTGAGGGCCTTGAGGCAGAGGCAGCTGGACCGAGCCGAGGCTGCTGCTGTAGAACCTGATGTTGTTGTTAAACGACAAGAAGCTTTAGCTGCTGCTCGTTTAAAAATGCAAGAAGAACTAAATGCACAAGTTGAAAAGCATAAGGAAAAATTAAGACAGCTTGAAGAAGAGAAAAGAAGACAGAAGATTGAAATGTGGGACAGCATGCAAGAAGGCAAAAGTTACAAGCGAAATGCAAGAAAACCTCAGGAGGACAGTCCTGGGCCTTCTACTTCATCCACCATCCCGAAGCGGAAATCTGACAAGAAGCCCTTGCGGGGAAGTGGTTACAACCCTCTGACGGGCGAAGGAGGTGGAGCCTGCTCCTGGAGACCTGGACGCAGAGGCCCGTCGTCCGGCGGGTGA

Related Sequences

XP_004852728.1 Protein

Vimp PREDICTED: selenoprotein S [Heterocephalus glaber]

Length: 188 aa      
>XP_004852728.1
MDRDGELLSARPALETEGLRFLHVTVGSLLATYGWYILFSCILLYVVFQKLYIRLRALRQRQLDRAEAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEEKRRQKIEMWDSMQEGKSYKRNARKPQEDSPGPSTSSTIPKRKSDKKPLRGSGYNPLTGEGGGACSWRPGRRGPSSGG