Sequence details NCBI ID: XM_004851900.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ckap5
Gene Name cytoskeleton associated protein 5, transcript variant X2
Entrez Gene ID 101719740

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CKAP5 ENSCPOG00000007054 (Guinea pig)

Gene Details

cytoskeleton associated protein 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006364, Guinea pig)

Protein Percentage 97.33%
CDS Percentage 94.25%
Ka/Ks Ratio 0.07121 (Ka = 0.0138, Ks = 0.1939)

CKAP5 ENSG00000175216 (Human)

Gene Details

cytoskeleton associated protein 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000432768, Human)

Protein Percentage 96.31%
CDS Percentage 91.52%
Ka/Ks Ratio 0.05771 (Ka = 0.0187, Ks = 0.3246)

Ckap5 ENSMUSG00000040549 (Mouse)

Gene Details

cytoskeleton associated protein 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106970, Mouse)

Protein Percentage 94.98%
CDS Percentage 89.39%
Ka/Ks Ratio 0.05575 (Ka = 0.0249, Ks = 0.4465)

Ckap5 ENSRNOG00000016067 (Rat)

Gene Details

Protein Ckap5

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021837, Rat)

Protein Percentage 94.64%
CDS Percentage 88.93%
Ka/Ks Ratio 0.05781 (Ka = 0.0271, Ks = 0.4694)

Genome Location

Sequence Coding sequence

Length: 6105 bp    Location: 1762025..1875863   Strand: +
Raw sequence   
>XM_004851900.1
ATGGGAGATGACAGTGAATGGTTGAAATTGCCGGTTGATCAGAAGTGTGAACACAAGCTGTGGAAAGCAAGGTTAAGTGGATATGAAGAGGCCCTGAAGATCTTCCAGAAAATAAAGGATGAAAAGAGCCCAGAATGGTCCAAATTTTTAGGACTGATCAAAAAATTTGTCACTGATTCCAACGCAGTGGTTCAGTTGAAAGGACTTGAAGCTGCACTTGTTTATGTTGAAAATGCCCACGTTGCAGGAAAAACCACGGGAGAAGTTGTGTCAGGTGTTGTAAGTAAAGTGTTCAACCAACCTAAAGCCAAAGCCAAGGAGCTGGGCATAGAGATTTGCCTCATGTACATAGAGATTGAGAAAGGAGAGGCTGTGCAAGAAGAGCTCCTAAAAGGATTGGACAATAAGAACCCTAAGATCATAGTGGCCTGCATAGAGACACTGAGGAAAGCCTTAAGTGAATTTGGTTCCAAAATCATCTTGCTTAAACCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCTCGAGAGAAGGCTGTTCGAGATGAAGCCAAATTAATTGCTGTGGAGATATACAGATGGATTCGGGATGCCCTGAGACCCCCATTACAAAATATAAACTCTGTACAGTTGAAAGAACTAGAAGAAGAATGGGTCAAACTACCAACAGGTGCTCCTAAACCAACTCGGTTTCTGCGTTCCCAACAAGAACTAGAAGCTAAACTAGAGCAGCAACAGTCTGCTGGTGGTGATGCTGAAGGGGGTGGTGACGACGGTGATGAGGTGCCACAAATAGATGCGTATGAGCTTTTGGAAGCAGTAGAGATCCTTTCCAAACTTCCCAAAGATTTTTATGACAAAATTGAGGCAAAAAAATGGCAAGAGAGAAAAGAAGCCCTGGAGGCTGTAGAAGTGCTAGTGAAAAACCCCAAACTGGAAGCAGGAGATTATGCGGATTTAGTAAAAGCTTTAAAGAAGGTTGTTGGAAAGGACACCAATGTCATGTTGGTAGCTCTGGCAGCAAAATGTCTTACTGGCCTGGCTGTTGGGCTAAGGAAGAAATTTGGACAATATGCAGGACATGTTGTGCCAACCATTTTGGAGAAATTCAAAGAGAAGAAGCCTCAAGTGGTACAAGCCCTGCAGGAGGCAATTGATGCAATTTTCCTCACTACCACACTACAGAACATCAGTGAGGATGTGTTAGCAGTGATGGATAATAAAAACCCAACTATCAAGCAGCAGACCTCTCTGTTTATTGCAAGAAGCTTCTGTCACTGCACTGCTTCTACCCTGCCAAAGAGCTTGTTAAAGCCCTTTTGTGCCGCTCTACTCAAGCACATCAATGATTCCGCTCCTGAAGTCAGAGATGCTGCATTTGAAGCCTTGGGTACCGCTTTGAAGGTGGTTGGTGAGAAAGCAGTCAACCCATTCTTAGCCGATGTAGACAAACTCAAGCTTGATAGGATCAAAGAATGTTCAGAAAAAGTAGAGCTGGTACATGGTAAGAAAGCTGGACTAGCAACTGATAAGAAGGAGTTCAAACCTGTGCCGGGAAGGACTGCTGGTTCAGGAGCTGCAGGAGATAAAGACACAAAGGATGTTTCAGCGCCCAAACCAGGACCCTTAAAAAAGGCACCTACCACTAAGGCTGGTGGACCACCTAAAAAGGGAAAACCAACTGCACCAGGAGGTTCAGGGAACACTGGCACCAAGAACAAAAAAGGATTGGAGACCAAAGAAATCGTGGAGCCTGAGCTCTCGATAGAAGTATGTGAAGAAAAAGCTTCAGCTGTCCTTCCCCCTACCTGTATACAGCTGCTTGACAGCAGTAACTGGAAGGAAAGGCTAGCCTGCATGGAAGAGTTCCAGAAGGCTGTTGAACTGATGGACCGAACTGAAATGCCATGCCAGGCATTAGTGAAGATGCTGGCCAAAAAACCTGGATGGAAAGAAACTAATTTTCAGGTGATGCAGATGAAGCTGCACATAGTTGCCCTGATTGCCCAGAAAGGATATTTTTCCAAAACTTCAGCTCAGATTGTGTTAGATGGCCTTGTAGACAAGATTGGAGATGTGAAATGTGGAAATAATGCAAAAGAAGCCATGACAGCAATGGCTGAGGCTTGTATGCTACCATGGACAGCTGAGCAGGTTATGTCAATGGCTTTCTCACAGAAGAATCCCAAGAACCAGTCAGAAACTCTGAATTGGCTATCAAATGCAATCAAGGAATTTGGTTTTTCTGGGTTGAATGTCAAAGCTTTCATTAGTAATGTGAAGACAGCTCTTGCTGCCACAAACCCAGCTGTGAGGACTTCTGCCATCACCTTACTTGGTGTGATGTATCTGTATGTTGGTCCCTCTTTGCGAATGTTCTTTGAGGATGAGAAGCCTGCCCTCCTGTCACAGATAGATGCAGAATTCGAGAAGATGCAGGGACAGAGCCCACCTGCTCCAACCAGAGGGCTCTCCAAGCACAGCACTGGAGGTGCAGATGAAGGAGAAGATGGAGATGAACCAGATGACGGAGGCAATGATGTTATCGATCTTTTGCCGAGGACAGAGATTGGTGATAAAATTACCTCAGAGTTGGTGTCTAAGATTGGTGACAAGAATTGGAAGATCAGGAAGGAAGGACTAGATGAAGTGGCAGGCATTATCAATGAAGCAAAGTTTATCCAACCAAATATAGGTGAACTTCCAACTGCCTTGAAGGGTCGGCTCAATGATTCAAATAAAATCTTGGTCCAGCAGACACTGAATATCCTCCAGCAGCTGGCAGTAGCCATGGGCCCAAACATCAAGCAACACGTAAAGAACTTGGGCATTCCTATCATCACAGTCCTTGGAGACAGCAAGAACAATGTTCGTGCTGCTGCCCTAGCAACTGTAAATGCCTGGGCAGAGCAGACTGGCATGAAAGAGTGGCTGGAGGGAGAAGATCTTTCTGAGGAGCTCAAAAAGGAGAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTGGCTGGCTGAGAAACTACCTACTCTTCGTTCCACCCCTACAGACCTAATTCTCTGTGTTCCTCATCTCTACTCCTGCCTGGAAGATCGAAATGGAGATGTGAGAAAGAAGGCCCAAGATGCTTTGCCATTCTTCATGATGCATTTAGGATATGAAAAAATGGCCAAGGCTACTGGAAAACTAAAGCCAGCTTCTAAAGATCAAGTACTGGCCATGCTAGAGAAAGCCAAAGCTAACATGCCAACCAAGCCCACTGCACCTGCTAAAGTGACATCCAAGTCAGTGGGAGGGTCGGCCCCGGCCAAATTCCAGCCAACATCAGCATCTGTTGAAGAGTCTGTTTCCTGCACTGTAGAAGCCAAGCCTGATCCGAAAAAGGCCAAAGTTCCAGGGGTCTCCTCTAAAACAAAGAGTACACAAGGAAAAAAAGTACCAAGCAAAACCAGCTTAAAGGAGGATGAAGACAAATCTGGACCCATTTTTATTGTTGTTCCAAATGGAAAGGAGCAAAGGATGAAAGATGAAAAGGGATTAAAGGTGTTGAAGTGGAATTTTACCACCCCACGGGATGAATACATAGAACAGCTGAAGACTCAGATGTCTAGCTGTGTGGCTAAATGGTTACAAGATGAGATGTTTCATTCAGATTTTCAGCACCACAATAAAGCTCTGGCTGTCATGGTCGATCACTTGGAGAGTGAAAAAGAAGGTGTCATTGGTTGTCTGGATCTTATCTTAAAATGGCTTACCCTGAGGTTTTTTGACACCAATACAAGTGTCCTAATGAAAGCACTGGAATATTTAAAATTGCTCTTCACACTGCTGAGTGAGGAGGAATATCATCTCACTGAAAATGAAGCATCTTCCTTCATTCCCTATCTCATCCTCAAGGTTGGAGAACCAAAAGATGTCATTCGGAAAGATGTTCGTGCCATCCTAAACCGGATGTGCCTTGTCTACCCAGCCAGCAAGATGTTCCCCTTTGTCATGGAAGGAACTAAATCCAAAAACTCTAAGCAGAGAGCAGAGTGCCTGGAGGAGCTGGGCTGTCTGGTCGAGTCCTATGGCATGAATGTTTGCCAACCAACCCCGGGAAAAGCCTTAAAGGAGATAGCTGTTCACATAGGGGACCGGGATAATGCTGTCCGCAACGCAGCTCTTAACACCATCGTCACAGTGTACAATGTCCACGGAGATCAGGTGTTCAAACTGATTGGCAATCTTTCTGAGAAGGATATGAGCATGCTTGAGGAGAGGATTAAGCGGTCAGCAAAGAGGCCCTCTGCTGCACCGATGAAACAGGTGGAAGAGAAACCGCAGCGCACCCAGAACGCATCCTCCAATGCCAACATGCTGCGCAAGGGCCCGGCTGAGGACATGTCCTCCAAACTCAACCAAGCCCGAGGCATGAGTGGGCATCCTGAGGCCGGCCAGATGGTTCGTCGAGAATTCCAGCTGGACCTTGATGAGATTGAGAATGACAACGGTACAGTCCGATGTGAGATGCCAGAACTTGTCCAGCATAAACTGGATGACATATTTGAACCGGTTCTTATTCCTGAGCCCAAGATCCGGGCTGTTTCTCCACACTTTGATGACATGCACAGTAATACAGCATCCACAATCAATTTCATTATCTCCCAAGTAGCCAGTGGTGACATCAACGCAAGTATCCAAGCTCTGACACAGATTGATGAGGTCCTGAGACAGGAAGACAAAGCCGAAGCTATGTCTGGACACATTGATCAGTTTCTGATAGCCACCTTCATGCAGCTAAGACTTATCTACAACACACACATGGCAGATGAGAAGCTGGAGAAGGATGAGATCATCAAGCTGTACAGCTGCATCATCGGCAACATGATCTCGCTGTTTCAGATTGAAAGCCTGGCCCGGGAGGCCTCCACCGGAGTCCTGAAAGACCTGATGCATGGCCTCATCACCTTGATGCTGGATTCTCGGATCGAAGACCTGGAGGAGGGGCAGCAGGTGATCCGCTCAGTGAACCTCTTGGTGGTGAAGGTTCTGGAGAAGTCAGACCAGACCAACATCTTGAGTGCCCTACTTGTTTTGCTCCAAGACAGCCTGCTAGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTGTTATGAAGTGTCTTTGGAGAATGGTTCGGCTATTACCCGACACCATCAACAGCATCAACCTGGATAGAATTCTTCTGGACATCCACATCTTCATGAAAGTCTTCCCCAAGGAAAAACTGAAGCAATGCAAAAGTGAATTTCCTATAAGGACTCTAAAGACCCTGCTGCATACCTTATGCAAATTAAAGGGCCCCAAGATCCTGGACCACCTCACCATGATTGAGAACAAGAATGAGTCCGAGTTGGAGGCCCACCTCTGCCGGATGATGAAGCATAGCATGGACCAGGCTGGGAGCAAGTCTGAGAAGGAAACTGAAAAGGGAGCCTCTCGAATAGATGAAAAATCATCAAAGGCCAAAGCGAATGACTTCTTAGCTGAGATTTTTAAGAAGATTGGCTCTAAAGAAAACACTAAAGAGGGCTTAGCAGAGTTATATGAATATAAGAAGAAATATTCAGATGCTGATATTGAACCATTTTTGAAAAATTCCTCACAATTCTTCCAGAGTTATGTTGAAAGAGGCCTTCGGGTGATTGAGATGGAGAGGGAGGGCAAAGGCCGGATTCCCACTTCCACAGGCATCTCGCCTCAGATGGAGGTCACCTGTGTGCCCGCCCCTACAAGCACAATGTCCTCCATAGGTAACACAAATGGCGAAGAGGTGGGACCGTCTGTCTACCTGGAAAGGCTAAAAATCCTCCGGCAGAGATGCGGGCTGGACAACACCAAGCAAGACGACCGGCCTCCGCTGACCTCTTTGCTCTCCAAGCCCACGGTGCCCCCGGTGGCCTCCTCCACAGACATGCTGCACAGCAAGCTGTTCCAGCTGCGGGAGTCGCGTGAGCAGCACCAGCACTCGGAGCTGGATTCCAACCAGACCCACTCGGCGGGCACCATGACCTCCTCCTCCTCCTCCTCCACAACCAACATTGACGACTTGAAAAAAAGACTGGAGAGAATAAAGAGCAGTCGCAAATGA

Related Sequences

XP_004851957.1 Protein

Ckap5 PREDICTED: cytoskeleton-associated protein 5 isoform X2 [Heterocephalus glaber]

Length: 2034 aa      View alignments
>XP_004851957.1
MGDDSEWLKLPVDQKCEHKLWKARLSGYEEALKIFQKIKDEKSPEWSKFLGLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTTGEVVSGVVSKVFNQPKAKAKELGIEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKIILLKPIIKVLPKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQNINSVQLKELEEEWVKLPTGAPKPTRFLRSQQELEAKLEQQQSAGGDAEGGGDDGDEVPQIDAYELLEAVEILSKLPKDFYDKIEAKKWQERKEALEAVEVLVKNPKLEAGDYADLVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVVPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARSFCHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADVDKLKLDRIKECSEKVELVHGKKAGLATDKKEFKPVPGRTAGSGAAGDKDTKDVSAPKPGPLKKAPTTKAGGPPKKGKPTAPGGSGNTGTKNKKGLETKEIVEPELSIEVCEEKASAVLPPTCIQLLDSSNWKERLACMEEFQKAVELMDRTEMPCQALVKMLAKKPGWKETNFQVMQMKLHIVALIAQKGYFSKTSAQIVLDGLVDKIGDVKCGNNAKEAMTAMAEACMLPWTAEQVMSMAFSQKNPKNQSETLNWLSNAIKEFGFSGLNVKAFISNVKTALAATNPAVRTSAITLLGVMYLYVGPSLRMFFEDEKPALLSQIDAEFEKMQGQSPPAPTRGLSKHSTGGADEGEDGDEPDDGGNDVIDLLPRTEIGDKITSELVSKIGDKNWKIRKEGLDEVAGIINEAKFIQPNIGELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTGMKEWLEGEDLSEELKKENPFLRQELLGWLAEKLPTLRSTPTDLILCVPHLYSCLEDRNGDVRKKAQDALPFFMMHLGYEKMAKATGKLKPASKDQVLAMLEKAKANMPTKPTAPAKVTSKSVGGSAPAKFQPTSASVEESVSCTVEAKPDPKKAKVPGVSSKTKSTQGKKVPSKTSLKEDEDKSGPIFIVVPNGKEQRMKDEKGLKVLKWNFTTPRDEYIEQLKTQMSSCVAKWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDTNTSVLMKALEYLKLLFTLLSEEEYHLTENEASSFIPYLILKVGEPKDVIRKDVRAILNRMCLVYPASKMFPFVMEGTKSKNSKQRAECLEELGCLVESYGMNVCQPTPGKALKEIAVHIGDRDNAVRNAALNTIVTVYNVHGDQVFKLIGNLSEKDMSMLEERIKRSAKRPSAAPMKQVEEKPQRTQNASSNANMLRKGPAEDMSSKLNQARGMSGHPEAGQMVRREFQLDLDEIENDNGTVRCEMPELVQHKLDDIFEPVLIPEPKIRAVSPHFDDMHSNTASTINFIISQVASGDINASIQALTQIDEVLRQEDKAEAMSGHIDQFLIATFMQLRLIYNTHMADEKLEKDEIIKLYSCIIGNMISLFQIESLAREASTGVLKDLMHGLITLMLDSRIEDLEEGQQVIRSVNLLVVKVLEKSDQTNILSALLVLLQDSLLATASSPKFSELVMKCLWRMVRLLPDTINSINLDRILLDIHIFMKVFPKEKLKQCKSEFPIRTLKTLLHTLCKLKGPKILDHLTMIENKNESELEAHLCRMMKHSMDQAGSKSEKETEKGASRIDEKSSKAKANDFLAEIFKKIGSKENTKEGLAELYEYKKKYSDADIEPFLKNSSQFFQSYVERGLRVIEMEREGKGRIPTSTGISPQMEVTCVPAPTSTMSSIGNTNGEEVGPSVYLERLKILRQRCGLDNTKQDDRPPLTSLLSKPTVPPVASSTDMLHSKLFQLRESREQHQHSELDSNQTHSAGTMTSSSSSSTTNIDDLKKRLERIKSSRK