Sequence details NCBI ID: XM_004851422.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101708783

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MRVI1 ENSCPOG00000022784 (Guinea pig)

Gene Details

murine retrovirus integration site 1 homolog

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016010, Guinea pig)

Protein Percentage 89.51%
CDS Percentage 91.52%
Ka/Ks Ratio 0.32477 (Ka = 0.0577, Ks = 0.1777)

MRVI1 ENSG00000072952 (Human)

Gene Details

murine retrovirus integration site 1 homolog

External Links

Gene Match (Ensembl Protein ID: ENSP00000412130, Human)

Protein Percentage 83.72%
CDS Percentage 86.7%
Ka/Ks Ratio 0.29232 (Ka = 0.0922, Ks = 0.3153)

Mrvi1 ENSMUSG00000005611 (Mouse)

Gene Details

MRV integration site 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000114578, Mouse)

Protein Percentage 80.96%
CDS Percentage 82.87%
Ka/Ks Ratio 0.19841 (Ka = 0.1056, Ks = 0.532)

Mrvi1 ENSRNOG00000017767 (Rat)

Gene Details

murine retrovirus integration site 1 homolog (Mrvi1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024060, Rat)

Protein Percentage 81.01%
CDS Percentage 82.34%
Ka/Ks Ratio 0.19351 (Ka = 0.1108, Ks = 0.5725)

Genome Location

Sequence Coding sequence

Length: 2697 bp    Location: 2729474..2653923   Strand: -
Raw sequence   
>XM_004851422.1
ATGGGAAGGAATTTGACTTGTCCTTTTGGCGTCTTCCCAGCCTGCGGAGCCGAGGCCTCTTGGNAGGCTGACGCAGCGGAGGTTCCAGGCACACGCGGCCACTCGNGCCAGGAGGTTGCCATGCCCCACATTCCCGAGGACGAGGAGCCCCCCGGAGAGCCACAGGCAGCCCAGAGCCCCACCAGCCAAGACGCTCCCTTGGCAGGAATATTCCACGGTCCACCTGCAATCGTCCTGACCGGGGATGCCAGTTCACCAGGAGAGGCCGACAGGTCCCTGGCCAACAGAGATCACAGTCCCCACAGGAGGCTTTCTCACCGACACCTGAAGGTCTCCACTGCACCCCTGACATCTGTGGACCCTGCGGGGCACATCATTGACCTGGTAAATGACCGGTTGCCTGACATCAGCATCTCAGAGGAGGACAAGAAGAAAAACCTGGCTCTCTTGGAAGAAGCCAAGTCGGTGAGTGAGCGATTCCTGACCCGGCGTGGGAGGAAGTCCAGGAGCAGCCCTGGAGACTCCCCATCAGCTGTCCCCCTGAGCCTCAGCCCCGGAGCCTCTCCTGTGCCCTCTAGGAGCAGCTCACTGACAGTCCCCACCCCGCCAGGTTTGGATGTGTGCAGCGGCCCACAGTCCCCTCAGCCAGGATCACCACCACAGCAGAAGCGGGATGAGGCAGACATCTCCTCACCTCACCTTGGCGAGCCTAATGTCCCCAAAGGGTTAGCTGACCGGAAGCAGCATGACCAAAGGAAAGTGTCTCAGGGCAGGATGGCTCTTCAATCTCCCCCTGTTGAGAAGTCCAAAGAGCTTGCAATAGAACAAAAGGAAAACTTCGATCCCCTCCAGCACCCTGAGACCACACCCAAGGGCCCAGTTTCTGGCACAAACAGCATTGGGAAAATGGCCCTGAACAGCCCCCCGCCTGTCTCAGCTGAGAGTGAGCCGGGGAGGCAGCTCCCAAAGATGGCCAGGGAAGGCAACCCTCTGCTGAGAAGTCCAGCCCAGGGTTTGGGAGGAGTGGTCTCACCAGGCACCCAGAGAAAAGGCTCCACTGGAGACCCCCCAGCATCCAAGGTTGGCCCCAAAGTCGAACTGCAGCCCCCTGAGTCCCGGCCACCCCTGATGCGGGGGGTCTCCTGGGACAGTGGCCCCGAAGAGCTGGGTCCCCCGTTGCAGAAAGTGCTTGCTAAGCTGCCAGTGGCAGAGGAGGAGAAGTGCTTCCCAGGCAAAGCGAGTGGCAAGCTGGCCAAGGTGCCAGGGCTTAAAGACTTCCAGATACAAGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCTACGTGAGGAGCACATCCTAATGAGAAACCAGAACCTGGTGGGCCTGAAGCTTCCTGAACTGAGCGAAGCAGCAGAGCAGGAGAAAGGGGTCCCTTCAGAACTCTCCCCAGCTACTGAGGAAGAAGAATCAAAGAGTGGCTTGGATGTCATGCCCAGTATTTCTGATGTGCTGCTGCGAAAGCTGCGGGTCCACAAGTCTCTCCCAGGAAGTGCACCTCCACTCACTGAAAAGGAAGTTGAGAACGTGTTTGTACAACTGTCCTTGGCCTTTAGAAATGACAGCTATACCCTGGAATCTAGAATTAACCAGGCTGAAAGAGAACGCAACCTGACTGAGGAGAACACTGAGAAGGAACTGGAAAACTTCAAAGCTTCCATTACGTCTTCAGCGTCGCTCTGGAACCACTGTGAGCACCGTGAGACCTACCAGAAGCTGCTGGAGGACATTGCAGTCTTGCATCGCCTGGCCGCCCGCCTCTCCAGCCGTGCTGAGGTGGTTGGGGCCGTCCGCCAGGAAAAGCGTATGTCAAAAGCAACAGAAGTGATGATGCAGTATGTGGAGAATCTGAAGAGGACGTATGAGAAGGACCACGCAGAGCTCATGGAGTTTAAGAAACTTGCAAATCAGAATTCAAGCCGCAGTTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCGCGGTCCATGTCCCTCACGATGGGAAAGAACATGCCCCGCCGGAGGGTCAGTGTTGCTGTGGTCCCCAAGTTTAATGCCCTGAACCTGCCTGGCCAGTCTCCCAGCTCATCACCCATCCCCTCCCTATCAGTTCTGTCAGAATCACCCAACGGGAAAGGCAACCTATCTGTCACCTCAGCACTGCCCGCACTTTTGGAAAATGGAAAGACCAGTGGGGAGTCAGACTGTGAAGGCCCAGCTCCCGTGCGGCCTCCAGTTTCCCTGGAGGTCAGCCAAGAGACCAAGGCCAGGATGGAGGAAGAAGCCTACAATAAGGGATATCAGGAAGGTTTAAAAAAGACCAAAGAACTTCAAGACTTGAAGGAGGAGGAAGAAGAACAGAAGAGTGAAAGTCTTGAGGAACATGAAGAGGTAGAAGAAACTGAGGAAGAGGAAAAGGACCAGAGAAACAGCAAACTTGAACAATTGGTCCATTTCTTACAAGTCATGTATCCTAAACTCTGTCGGCACTGGCAAGTGATCTGGATGATGGCTGCAGTGATGCTGATCTTGACTATCGTGCTGGGGCTCTATAATTCCTATAAGTCTTGTGTGGAGCAGTCTGATGGGCCCCTTGGAAGATCCACTTGCTCCACAACCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAATAG

Related Sequences

XP_004851479.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: protein MRVI1 [Heterocephalus glaber]

Length: 898 aa      View alignments
>XP_004851479.1
MGRNLTCPFGVFPACGAEASWXADAAEVPGTRGHSXQEVAMPHIPEDEEPPGEPQAAQSPTSQDAPLAGIFHGPPAIVLTGDASSPGEADRSLANRDHSPHRRLSHRHLKVSTAPLTSVDPAGHIIDLVNDRLPDISISEEDKKKNLALLEEAKSVSERFLTRRGRKSRSSPGDSPSAVPLSLSPGASPVPSRSSSLTVPTPPGLDVCSGPQSPQPGSPPQQKRDEADISSPHLGEPNVPKGLADRKQHDQRKVSQGRMALQSPPVEKSKELAIEQKENFDPLQHPETTPKGPVSGTNSIGKMALNSPPPVSAESEPGRQLPKMAREGNPLLRSPAQGLGGVVSPGTQRKGSTGDPPASKVGPKVELQPPESRPPLMRGVSWDSGPEELGPPLQKVLAKLPVAEEEKCFPGKASGKLAKVPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPELSEAAEQEKGVPSELSPATEEEESKSGLDVMPSISDVLLRKLRVHKSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEKELENFKASITSSASLWNHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTMGKNMPRRRVSVAVVPKFNALNLPGQSPSSSPIPSLSVLSESPNGKGNLSVTSALPALLENGKTSGESDCEGPAPVRPPVSLEVSQETKARMEEEAYNKGYQEGLKKTKELQDLKEEEEEQKSESLEEHEEVEETEEEEKDQRNSKLEQLVHFLQVMYPKLCRHWQVIWMMAAVMLILTIVLGLYNSYKSCVEQSDGPLGRSTCSTTQRDSWWSSGLQHEQPTEQ