Details from NCBI annotation

Gene Symbol Col9a2
Gene Name collagen, type IX, alpha 2
Entrez Gene ID 101720556

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COL9A2 ENSCPOG00000011524 (Guinea pig)

Gene Details

collagen, type IX, alpha 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010366, Guinea pig)

Protein Percentage 89.1%
CDS Percentage 88.37%
Ka/Ks Ratio 0.36314 (Ka = 0.081, Ks = 0.223)

COL9A2 ENSG00000049089 (Human)

Gene Details

collagen, type IX, alpha 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000361834, Human)

Protein Percentage 90.55%
CDS Percentage 88.32%
Ka/Ks Ratio 0.21728 (Ka = 0.0605, Ks = 0.2786)

Col9a2 ENSMUSG00000028626 (Mouse)

Gene Details

collagen, type IX, alpha 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030372, Mouse)

Protein Percentage 90.7%
CDS Percentage 86.48%
Ka/Ks Ratio 0.13773 (Ka = 0.0552, Ks = 0.4008)

Col9a2 ENSRNOG00000011502 (Rat)

Gene Details

collagen, type IX, alpha 2 (Col9a2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049994, Rat)

Protein Percentage 90.7%
CDS Percentage 86.77%
Ka/Ks Ratio 0.15048 (Ka = 0.0567, Ks = 0.3771)

Genome Location

Sequence Coding sequence

Length: 2067 bp    Location: 22795769..22782027   Strand: -
>XM_004851050.1
ATGGCCGCAGCCGCAGCCCCCAGAGGCCTCCTCATTCTGCTCCAGGTGCTCGGGCTCGCGCTGGCGCAGATCAAAGGTCTGCCTGGAGAGCGGGGTCCTCCGGGCCCCCCGGGGCCACCGGGAATGCCTGGATCGGATGGCATCGACGGTGACAAGGGGCCCCCTGGGAAAGCTGGCCCTGCGGGGCCCAAGGGAGAGTCTGGCAGGCTGGGGCCAGATGGGCCAGATGGGAAGCCAGGGATTGATGGTTTAACTGGAGCCAAGGGAGAGCCTGGTCCCATGGGAACACCTGGAGTCAAGGGCCAGCCTGGGCTCCCAGGTCCCCCTGGCCTGCCGGGCCCTGGTTTTGCTGGACCTCCTGGGCCACCCGGACCTGTTGGCCTCCCCGGTGAGATCGGAATCCCAGGCCCCAAGGGGGATCCAGGACCACAGGGACCATCAGGGCCCCCAGGGCCTCCTGGGAAAGCAGGGCGCCCAGGAACCATCCAGGGCCTGGAAGGGAGTGCTGATTTCCTGTGTCCGACCAACTGTCCAGCGGGTGTCAAAGGCCCCCCAGGGCTGCAGGGAGTTAAGGGGCATCCAGGCAAACGTGGGGTTCTGGGGGATCCTGGCCGTCAGGGGAAGCCGGGTCCCAAAGGAGATGTGGGTGCCTCTGGAGAGCAAGGCATCCCTGGACCACCGGGTCCCCAGGGCATCAGGGGCTACCCAGGAATGGCAGGACCCAAGGGAGAGATGGGTCCTCAAGGGTATAAAGGCATGGTGGGCTCCATTGGTGCTGCTGGGTCACCGGGTGAGGAAGGTCTGAGGGGACCACCAGGCCAAGCTGGGGAGAAGGGCGACATGGGCAGCCAAGGTGTTCGAGGACCTCAGGGCATAGCAGGCCCAAAGGGAGCAACCGGCTCCCCAGGCATCGATGGCAAGGACGGGACCCCAGGCACACCTGGCATGAAAGGCAGCGCAGGACAGGCAGGGCGTCCAGGGAACCCAGGCCACCAAGGCCTAGCGGGTGTGCCAGGCCAGTCTGGAACAAAAGGAGGTCCGGGGGACAAGGGCGAGCCAGGCCAGCAGGGCCTCCCTGGATTCTCTGGTCCCCCTGGGAAGGAGGGAGAGCCAGGGCCTCAAGGAGAAACTGGTCCCCGGGGCACTGTGGGGGAGAAGGGTGATCAGGGTGAGAGGGGGCCCGTGGGGCAGCCAGGCCCTCAAGGACGACAGGGCCCCAAGGGGGAACAGGGCCCCCCTGGAATTCCAGGGCCCCAAGGCTTGCCAGGCATCAAGGGAGACAAGGGCTTCCCAGGGAAGACCGGGCCCCGCGGCGGAGTGGGAGACCCAGGAGTGGCCGGCCTCCCCGGAGAGAAAGGCGAGAAGGGCGAGTCTGGCGAGCCTGGGCCCAAGGGACAGCAAGGAGTCCGAGGAGAACCTGGCTACCCTGGCCCCAGCGGGGATGCAGGTGCCCCAGGGGTGCAGGGCTACCCTGGGCTGCCCGGCCCTCGAGGACTGGCTGGAGACCGAGGTCTGCCAGGACAGCCCGGGAGACAGGGCGTAGCGGGCCGAGATCCCAGTGACCAGCACATTGTGGACGTGGTGCTGAAGATGATGCAAGAGCAACTGGCAGAGGTGGCTGTGAGTGCCAAGCGGGAAGCCCTAGGTGCAGCAGGGATGATGGGTCCTCCAGGACCCCCTGGGCCACCTGGGTACCCAGGCAAGCAGGGACCCCATGGGCACCCTGGCCCTCGGGGGATTCCTGGTGTCATAGGAGCTGTGGGTCAGATTGGCAACACAGGACCCAAGGGAAAGCGTGGAGAGAAAGGTGACCAAGGTGAAGTAGGACGAGGGCACCCAGGGATGCCTGGTCCCCCAGGGATCCCAGGACTCCCTGGCCGGCCTGGCCAGGCAATCAATGGCAAGGATGGAGACCGAGGGTCCCCAGGGGCTCCAGGAGAAGCAGGCCGACCTGGCCTGCCAGGCCCTGTGGGGCTGCCAGGGTTCTGTGACCCTGCAGCCTGCCTTGGAGCATCAGCCTATGCCTCTGCCCGCCTCACAGAGCCTGGATCCATTAAGGGACCGTGA

Related Sequences

XP_004851107.1 Protein

Col9a2 PREDICTED: collagen alpha-2(IX) chain [Heterocephalus glaber]

Length: 688 aa      View alignments
>XP_004851107.1
MAAAAAPRGLLILLQVLGLALAQIKGLPGERGPPGPPGPPGMPGSDGIDGDKGPPGKAGPAGPKGESGRLGPDGPDGKPGIDGLTGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGIPGPKGDPGPQGPSGPPGPPGKAGRPGTIQGLEGSADFLCPTNCPAGVKGPPGLQGVKGHPGKRGVLGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGEMGPQGYKGMVGSIGAAGSPGEEGLRGPPGQAGEKGDMGSQGVRGPQGIAGPKGATGSPGIDGKDGTPGTPGMKGSAGQAGRPGNPGHQGLAGVPGQSGTKGGPGDKGEPGQQGLPGFSGPPGKEGEPGPQGETGPRGTVGEKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGIKGDKGFPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGLPGPRGLAGDRGLPGQPGRQGVAGRDPSDQHIVDVVLKMMQEQLAEVAVSAKREALGAAGMMGPPGPPGPPGYPGKQGPHGHPGPRGIPGVIGAVGQIGNTGPKGKRGEKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCDPAACLGASAYASARLTEPGSIKGP