Details from NCBI annotation

Gene Symbol Pabpc4
Gene Name poly(A) binding protein, cytoplasmic 4 (inducible form), transcript variant X2
Entrez Gene ID 101712162

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PABPC4 ENSCPOG00000009552 (Guinea pig)

Gene Details

poly(A) binding protein, cytoplasmic 4 (inducible form)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008574, Guinea pig)

Protein Percentage 99.55%
CDS Percentage 95.91%
Ka/Ks Ratio 0.01413 (Ka = 0.0022, Ks = 0.1542)

PABPC4 ENSG00000090621 (Human)

Gene Details

poly(A) binding protein, cytoplasmic 4 (inducible form)

External Links

Gene Match (Ensembl Protein ID: ENSP00000361949, Human)

Protein Percentage 99.55%
CDS Percentage 94.7%
Ka/Ks Ratio 0.00997 (Ka = 0.0022, Ks = 0.2157)

Genome Location

Sequence Coding sequence

Length: 1983 bp    Location: 22086716..22069218   Strand: -
>XM_004851025.1
ATGAACGCTGCAGCCAGCAGCTACCCCATGGCCTCCCTCTACGTGGGCGATCTGCACTCGGACGTCACCGAGGCCATGCTATATGAAAAGTTCAGTCCGGCGGGCCCTGTGCTGTCCATCCGGGTCTGCCGCGATATGATCACCCGCCGCTCCCTGGGTTATGCCTACGTCAACTTCCAGCAGCCAGCTGACGCTGAGCGGGCCTTGGACACCATGAACTTTGATGTGATTAAAGGAAAGCCAATCCGTATCATGTGGTCCCAGAGGGATCCCTCTTTGAGAAAGTCTGGTGTGGGAAATGTCTTCATCAAGAACCTGGACAAATCTATAGATAACAAGGCACTTTATGATACCTTCTCTGCTTTTGGAAACATTCTGTCCTGTAAGGTGGTGTGTGACGAGAATGGCTCTAAGGGTTATGCCTTTGTCCACTTCGAGACCCAAGAGGCTGCAGACAAGGCCATCGAGAAGATGAATGGCATGCTTCTCAATGACCGCAAAGTGTTTGTAGGCAGATTCAAGTCTCGAAAAGAGCGGGAGGCTGAGCTTGGAGCCAAAGCCAAGGAATTCACCAATGTTTATATCAAGAACTTTGGAGAAGAGGTGGATGATGAAAGTCTGAAGGAGCTATTCAGCCAGTTTGGTAAGACCCTAAGTGTCAAGGTGATGAGAGATCCCAGTGGGAAATCCAAAGGCTTTGGCTTTGTGAGTTACGAAAAACATGAGGATGCCAATAAGGCCGTGGAAGAAATGAATGGAAAAGAAATCAGTGGGAAGGTCATATTTGTAGGCCGTGCACAGAAGAAAGTAGAACGGCAGGCTGAATTAAAACGGAAATTTGAGCAGCTGAAACAGGAGAGAATTAGTCGATACCAGGGTGTGAATCTCTACATTAAGAACTTGGATGACACCATTGATGATGAGAAATTAAGGAAAGAATTTTCTCCTTTTGGATCAATCACCAGTGCTAAGGTAATGCTGGAGGATGGAAGAAGCAAAGGGTTTGGTTTTGTCTGTTTCTCATCTCCTGAGGAGGCAACCAAAGCAGTCACTGAAATGAATGGGCGCATCGTGGGTTCCAAGCCACTGTATGTTGCCCTAGCCCAGAGGAAGGAAGAGAGAAAGGCTCACCTAACCAACCAGTACATGCAGCGGGTGGCTGGAATGAGAGCACTCCCTGCCAATGCCATCTTAAACCAGTTCCAGCCTGCAGCTGGTGGCTACTTCGTGCCAGCAGTTCCACAGGCTCAGGGAAGACCTCCATATTACACACCTAACCAGTTGGCACAGATGAGGCCTAATCCGCGCTGGCAGCAAGGTGGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCTATACGCCAGTCTGGGCCTCGTCCAACTCTTCGCCATCTGGCTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTCCCTACTACCACTCAGAGAGTCGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGTGGGGCTGGTGCCGCCCAGCAAGGGCTGACTGACAGCTGCCAGTCTGGAGGTGTTCCCACAGCAGTGCCGAACCTTGCACCTCGGGCTGCAGTTGCTGCTGCTGCTCCTCGGGCTGTGGCACCATACAAGTATGCCTCCAGTGTCCGCAGCCCACACCCTGCCATACAGCCTCTGCAGGCACCCCAGCCTGCAGTCCATGTGCAGGGGCAGGAGCCCCTGACTGCCTCCATGCTGGCTGCAGCACCCCCCCAGGAACAGAAGCAGATGCTGGGAGAACGCTTGTTCCCACTTATCCAAACAATGCATTCAAACCTGGCTGGCAAGATCACGGGCATGCTGCTGGAGATTGACAACTCGGAGCTGCTGCACATGCTCGAGTCCCCCGAGTCTCTCCGCTCCAAGGTGGATGAAGCTGTGGCAGTTCTACAGGCTCATCATGCCAAGAAGGAAGCTGCCCAGAAGGTGGGCGCTGTTGCTGCTGCTACCTCTTAG

Related Sequences

XP_004851082.1 Protein

Pabpc4 PREDICTED: polyadenylate-binding protein 4 isoform X2 [Heterocephalus glaber]

Length: 660 aa     
>XP_004851082.1
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVPNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS