Details from NCBI annotation

Gene Symbol Trappc3
Gene Name trafficking protein particle complex 3, transcript variant X1
Entrez Gene ID 101718690

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAPPC3 ENSCPOG00000000557 (Guinea pig)

Gene Details

trafficking protein particle complex 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000489, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 97.22%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0957)

TRAPPC3 ENSG00000054116 (Human)

Gene Details

trafficking protein particle complex 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000362261, Human)

Protein Percentage 99.44%
CDS Percentage 94.81%
Ka/Ks Ratio 0.01127 (Ka = 0.0025, Ks = 0.2252)

Trappc3 ENSMUSG00000028847 (Mouse)

Gene Details

trafficking protein particle complex 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030660, Mouse)

Protein Percentage 98.89%
CDS Percentage 89.81%
Ka/Ks Ratio 0.01028 (Ka = 0.0053, Ks = 0.5129)

Trappc3 ENSRNOG00000010550 (Rat)

Gene Details

trafficking protein particle complex 3 (Trappc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014383, Rat)

Protein Percentage 98.89%
CDS Percentage 90.74%
Ka/Ks Ratio 0.01107 (Ka = 0.0051, Ks = 0.4634)

Genome Location

Sequence Coding sequence

Length: 543 bp    Location: 19136872..19127087   Strand: -
>XM_004850951.1
ATGTCGAGGCAAGCGAACCGTGGCACCGAGAGCAAGAAAATGAGCTCTGAACTCTTCACCCTGACCTACGGAGCTCTTGTCACCCAGCTATGCAAAGACTATGAAAATGATGAAGATGTGAATAAACAGCTAGACAAAATGGGCTATAACATAGGAGTCCGACTGATTGAAGATTTCTTGGCACGGTCAAATGTTGGGAGATGCCATGACTTTCGGGAAACTGCAGATGTCATCGCCAAGGTGGCGTTCAAGATGTACTTGGGCATCACTCCAAGCATCACTAACTGGAGCCCAGCTGGTGACGAATTCTCCCTCATTTTGGAAAATAACCCCTTGGTGGACTTTGTGGAACTTCCTGATAACCACTCATCCCTTATTTATTCCAATCTCTTGTGTGGGGTATTGCGGGGAGCCTTGGAGATGGTCCAGATGGCAGTGGAGGCCAAGTTTGTCCAGGACACCCTGAAAGGAGACGGTGTAACAGAAATCCGGATGAGGTTCATCAGGAGGATTGAAGACAATCTCCCAGCTGGAGAAGAATGA

Related Sequences

XP_004851008.1 Protein

Trappc3 PREDICTED: trafficking protein particle complex subunit 3 isoform X1 [Heterocephalus glaber]

Length: 180 aa      View alignments
>XP_004851008.1
MSRQANRGTESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLPAGEE