Sequence details NCBI ID: XM_004850903.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Phc2
Gene Name polyhomeotic homolog 2 (Drosophila), transcript variant X4
Entrez Gene ID 101700417

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHC2 ENSCPOG00000003023 (Guinea pig)

Gene Details

polyhomeotic homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002737, Guinea pig)

Protein Percentage 93.75%
CDS Percentage 94.0%
Ka/Ks Ratio 0.27441 (Ka = 0.0372, Ks = 0.1356)

PHC2 ENSG00000134686 (Human)

Gene Details

polyhomeotic homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000257118, Human)

Protein Percentage 92.63%
CDS Percentage 91.89%
Ka/Ks Ratio 0.16299 (Ka = 0.0379, Ks = 0.2325)

Phc2 ENSMUSG00000028796 (Mouse)

Gene Details

polyhomeotic-like 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030588, Mouse)

Protein Percentage 88.88%
CDS Percentage 88.52%
Ka/Ks Ratio 0.17459 (Ka = 0.0606, Ks = 0.347)

Phc2 ENSRNOG00000006004 (Rat)

Gene Details

polyhomeotic homolog 2 (Drosophila) (Phc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059238, Rat)

Protein Percentage 90.4%
CDS Percentage 89.45%
Ka/Ks Ratio 0.16292 (Ka = 0.0521, Ks = 0.3199)

Genome Location

Sequence Coding sequence

Length: 2568 bp    Location: 16404716..16353186   Strand: -
Raw sequence   
>XM_004850903.1
ATGGAGAATGAGCTGCCAGTCCCACACACGTCCAGCAGTGCCGGTGCCACGAGCAGCACCAGTGGAGCCAATAGCAGCAGTGGCTGCAGCAATAGCAGCAGTGGTGGCAATGGCCGCCCCACTGGGCCCCAGATTTCTGTGTACAGTGGTATTCCTGACCGGCAGACTGTGCAGGTGATCCAGCAGGCCTTGCACCGGCAGCCCAGCACAGCAGCTCAGTACCTGCAGCAGATGTATGCCGCTCAGCAGCAGCACCTCATGCTGCAGACAGCCGCCCTGCAGCAGCAGCAGCTCAGCAGTGCCCAGCTCCAGAGCCTGGCAGCCGTACAGCAGGCAAGCCTGGTGGCCAACAGACAAGCGAGTACTTCTGGCAGCAGTGTGTCTGCACAGGCCCCAGCCCAGTCATCTTCGATCAACCTGGCAGCCTCCCCAGCAGCAGCCCAGCTCATCAACCGGGCCCAGAGTGTCAATCCAGCCACAGCCTCAGGCCTTGCCCAGCAGGCTGTGCTCTTGGGCAACACATCTTCTCCAGCCCTGACTGCAAGCCAAGCACAGATGTATCTCAGGGCGCAGATGCTCATCTTCACGCCCACGGCCACCGTCGCTACTGTGCAGCCTGAGCTCGGCACTGGCTCCCCCGCCCGGCCCCCAACCCCCGCCCAGGTACAGAACCTGACCCTCCGAACACAGCAGACACCAGCTGCAGCAGCCTCGGGCCCTTTCCCCACTCAGCCTGTCCTGCCCAGCTTGGCCCTGAAACCCACACTGGGCAGTAGCCAGCCTCTGCCTACCCCATCACAGGGCAGAAACACTGCTCAGGGTTCCCCTGCAGGTGCCAAGCCTGGCGTGGCTGACAGTGTGATGGAGCCACTCAAGAAAGGAGATGGCAACAGCAGCCTTCCAGGGAACATGGAGGGCCAGGCTGGCCTCGGCCGGACAGTTCCTGCTGTAGCTACCCACCCCCTCATTGCACCAGCTTATGCTCAGCTGCAGCCACATCAGCTGCTCCCACAGCCATCAACAAAGCACCTGCAGCCCCAGTTTGTGATCCAGCACCAGCCGCAGCTGCAACAGCACCCCCAACCACCACGGCCTGCTCCCCAAGCCCAGGCCCAACCCCAGCTAGCCTCAATTCCCCCAAGTGTGGCTCTGCAGCCCAGCTCAGAAGCCCACACCATGCCACTAGGCCCAGCTACACCCACCCTGCCACTCCAGTGTCCCACTGCCCATCTACACAAGCCCATCAGCAGTCAGCAATGTCACCCTTCCACGCCTGACCCTGGGCCTCAGAATGGACATCCCGAGGACATGTCCCACACCCCTCAGCGCAGGTTCCAGCACACCTCAGCTGTCATCTTACAACTACAGCCTGCTTCGCCACCTCAGCAGTGTGCCCCTGATGACTGGAAAGAAGTGGTGCCTGGGGAGAAGAGTGTGCCTGAGACTCGGTCAGGCCTATCACCACATCAGCAAGCCATTGTCACTGCCATGCCTGGTAGCCTGCCTATACCCAAGAGCCCTAACATCCAGCAGTGCCCAGCTCACGAGACAGGGCAGGGCATTGTTCATGCACTGACCAACCTCAGCAGCCCCGGCATGACCTCAGGGAACGGAAATTCTGCCTCCAGCATCGCCGGCACTGCCCCCCAGAATGGTGAGAATAAACCACCACAGGCCATTGTGAAACCCCAAATCCTGACGCATGTTATCGAAGGGTTTGTGATCCAGGAGGGGGCGGAGCCTTTCCCGGTGGGACGCTCATCCCTGCTGGTGGGGAATCTCAAGAAGAAGTATGCACAGGGATTCTTGCCTGAGAAACTTCCACAGCAGGACCATACCACCACCACTGACTCGGAGATGGAGGAGCCCTACCTGCAAGAATCCAAAGAGGAGGGTACTCCCCTCAAACTCAAGTGTGAGCTTTGTGGCCGGGTGGACTTTGCCTACAAGTTCAAGCGGTCCAAGCGCTTCTGTTCCATGGCTTGTGCAAAGAGGTATAATGTGGGGTGCACCAAGCGAGTGGGACTTTTCCACTCAGACCGGAGCAAGCTGCAGAAGTCAGGGGCCACAACCCACAACCGCCGCCGGGCTAGCAAGGCCAGTCTGCCAACACTTAGCAAGGATACCAAGAAGCAGCCAACAGGCACTGTACCCCTTTCAGTTACTGCTGCATTGCAGCTGACGCACAGTCAGGAAGACTCCAGCCGTTGCTCAGATAACTCAAGCTATGAAGAACCCTTGTCACCCATCTCAGCCAGCTCTTCCACCTCCCGCCGGCGACAAGGTCAGCGGGACCTGGAGCTCCCTGACATGCACATGCGGGATCTGGTAGGCATGGGACACCACTTCCTACCAAGTGAGCCCACCAAGTGGAACGTAGAAGATGTCTATGAATTCATCCGCTCTCTGCCAGGCTGCCAGGAGATCGCAGAGGAATTTCGTGCCCAGGAGATTGATGGGCAAGCCCTGCTGCTGCTCAAGGAGGACCACCTGATGAGCGCCATGAACATCAAGCTGGGGCCTGCCTTGAAGATCTACGCACGCATCAGCATGCTAAAGGACTCCTAG

Related Sequences

XP_004850960.1 Protein

Phc2 PREDICTED: polyhomeotic-like protein 2 isoform X4 [Heterocephalus glaber]

Length: 855 aa      View alignments
>XP_004850960.1
MENELPVPHTSSSAGATSSTSGANSSSGCSNSSSGGNGRPTGPQISVYSGIPDRQTVQVIQQALHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQQLSSAQLQSLAAVQQASLVANRQASTSGSSVSAQAPAQSSSINLAASPAAAQLINRAQSVNPATASGLAQQAVLLGNTSSPALTASQAQMYLRAQMLIFTPTATVATVQPELGTGSPARPPTPAQVQNLTLRTQQTPAAAASGPFPTQPVLPSLALKPTLGSSQPLPTPSQGRNTAQGSPAGAKPGVADSVMEPLKKGDGNSSLPGNMEGQAGLGRTVPAVATHPLIAPAYAQLQPHQLLPQPSTKHLQPQFVIQHQPQLQQHPQPPRPAPQAQAQPQLASIPPSVALQPSSEAHTMPLGPATPTLPLQCPTAHLHKPISSQQCHPSTPDPGPQNGHPEDMSHTPQRRFQHTSAVILQLQPASPPQQCAPDDWKEVVPGEKSVPETRSGLSPHQQAIVTAMPGSLPIPKSPNIQQCPAHETGQGIVHALTNLSSPGMTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGTPLKLKCELCGRVDFAYKFKRSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKSGATTHNRRRASKASLPTLSKDTKKQPTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKDS