Details from NCBI annotation

Gene Symbol Hpca
Gene Name hippocalcin, transcript variant X2
Entrez Gene ID 101726774

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HPCA ENSCPOG00000002489 (Guinea pig)

Gene Details

hippocalcin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002268, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 95.68%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.4184)

HPCA ENSG00000121905 (Human)

Gene Details

hippocalcin

External Links

Gene Match (Ensembl Protein ID: ENSP00000362566, Human)

Protein Percentage 100.0%
CDS Percentage 93.44%
Ka/Ks Ratio 0.001 (Ka = 0.0008, Ks = 0.7633)

Hpca ENSMUSG00000028785 (Mouse)

Gene Details

hippocalcin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112145, Mouse)

Protein Percentage 100.0%
CDS Percentage 92.75%
Ka/Ks Ratio 0.001 (Ka = 0.0008, Ks = 0.7942)

Hpca ENSRNOG00000006979 (Rat)

Gene Details

hippocalcin (Hpca), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009153, Rat)

Protein Percentage 100.0%
CDS Percentage 92.57%
Ka/Ks Ratio 0.001 (Ka = 0.0009, Ks = 0.8608)

Genome Location

Sequence Coding sequence

Length: 582 bp    Location: 15990869..15999617   Strand: +
>XM_004850889.1
ATGGGCAAGCAGAACAGCAAACTTCGGCCAGAGATGCTGCAGGACCTGCGGGAGAACACAGAGTTCTCGGAGCTGGAGCTGCAGGAGTGGTACAAGGGCTTCCTCAAGGACTGCCCCACGGGCATCCTCAACGTGGACGAGTTCAAGAAAATCTATGCCAACTTCTTCCCCTACGGTGATGCCTCCAAGTTCGCCGAGCACGTCTTCCGCACTTTTGACACCAACAGTGATGGGACCATCGACTTTCGGGAGTTCATCATTGCGCTGAGTGTGACCTCCCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGCCTTCAGCATGTACGACCTGGATGGCAATGGCTACATCAGCCGAGAGGAGATGCTGGAGATTGTGCAGGCCATTTACAAGATGGTTTCGTCCGTGATGAAGATGCCGGAGGACGAGTCGACCCCGGAAAAGAGGACTGAGAAGATCTTCCGCCAGATGGACACCAACAACGACGGCAAGTTGTCCCTGGAGGAGTTCATCCGTGGGGCAAAGAGCGACCCGTCCATCGTGCGCCTGCTGCAGTGCGATCCCAGCAGCGCCTCCCAGTTCTGA

Related Sequences

XP_004850946.1 Protein

Hpca PREDICTED: neuron-specific calcium-binding protein hippocalcin isoform X2 [Heterocephalus glaber]

Length: 193 aa      View alignments
>XP_004850946.1
MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIVRLLQCDPSSASQF