Details from NCBI annotation

Gene Symbol Tmem54
Gene Name transmembrane protein 54, transcript variant X2
Entrez Gene ID 101726159

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM54 ENSCPOG00000002488 (Guinea pig)

Gene Details

transmembrane protein 54

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002267, Guinea pig)

Protein Percentage 88.54%
CDS Percentage 89.93%
Ka/Ks Ratio 0.20667 (Ka = 0.0588, Ks = 0.2844)

TMEM54 ENSG00000121900 (Human)

Gene Details

transmembrane protein 54

External Links

Gene Match (Ensembl Protein ID: ENSP00000362562, Human)

Protein Percentage 83.33%
CDS Percentage 84.53%
Ka/Ks Ratio 0.18132 (Ka = 0.0958, Ks = 0.5284)

Tmem54 ENSMUSG00000028786 (Mouse)

Gene Details

transmembrane protein 54

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101679, Mouse)

Protein Percentage 74.89%
CDS Percentage 77.47%
Ka/Ks Ratio 0.20994 (Ka = 0.161, Ks = 0.7669)

Tmem54 ENSRNOG00000024259 (Rat)

Gene Details

transmembrane protein 54 (Tmem54), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033444, Rat)

Protein Percentage 75.93%
CDS Percentage 79.17%
Ka/Ks Ratio 0.19155 (Ka = 0.1421, Ks = 0.7421)

Genome Location

Sequence Coding sequence

Length: 669 bp    Location: 16002872..15999397   Strand: -
>XM_004850887.1
ATGGCTCTCCCCACAGGTGGTGTGAGTGTGGATGACTTCCAGAAAGTGCTAATGAAGACAGGCCTAGTGCTGGTGGTACTGGGCCACGTGAGCTTCATTGCAGCTGCCATCCTCCATGGCACCGTGCTGCGCTATGTGACTGCTCCCCATGATGCGGTGGCTCTGCAGTACTGTGTGGTCAACATCGTGTCCGTCACTTCTGCCATTGTGGTCATCTCCTCTGGCATTGCAGCCATCGTGTTGTCACGCTACCTCCCCAGCACCGCTCTGCGCTGGACAGTGTTTAGCTCCGGTGTGGCCTGTGCTCTTCTCTCTCTGACCTGTGCACTTGGCCTCTTGGCCTCGATCGCAGTGACCTTTGCCACCCAGGGCCGGGCACTGCTAGCTGTCTGCACTTTTGGGAACCCTGACCTGCTGGCGCTCACGCCCGACTGCCCTTTTGACCCCACACGCGTTTATAGCTCCAGCCTGTGCCTTTGGGGCATCTCACTCGTGCTGTGTGTAACGGAGAGTGTGTTTGCCGTGCGCTGCATCCAGCTTGCCCACCAGGTGCTGGAACTGAGGCCCTGGTGGGGGAAAAGCAGCCACCACACCATGCAGGAGAGCCCAGAGCCTGTGGAGGGCCACGACCTGATCAGCTGCACCAGCTCTGTGCCGCTGACCCTCTGA

Related Sequences

XP_004850944.1 Protein

Tmem54 PREDICTED: transmembrane protein 54 isoform X2 [Heterocephalus glaber]

Length: 222 aa      View alignments
>XP_004850944.1
MALPTGGVSVDDFQKVLMKTGLVLVVLGHVSFIAAAILHGTVLRYVTAPHDAVALQYCVVNIVSVTSAIVVISSGIAAIVLSRYLPSTALRWTVFSSGVACALLSLTCALGLLASIAVTFATQGRALLAVCTFGNPDLLALTPDCPFDPTRVYSSSLCLWGISLVLCVTESVFAVRCIQLAHQVLELRPWWGKSSHHTMQESPEPVEGHDLISCTSSVPLTL