Details from NCBI annotation

Gene Symbol Sync
Gene Name syncoilin, intermediate filament protein, transcript variant X3
Entrez Gene ID 101721006

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYNC ENSCPOG00000015355 (Guinea pig)

Gene Details

syncoilin, intermediate filament protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013840, Guinea pig)

Protein Percentage 89.41%
CDS Percentage 88.06%
Ka/Ks Ratio 0.165 (Ka = 0.0711, Ks = 0.4309)

SYNC ENSG00000162520 (Human)

Gene Details

syncoilin, intermediate filament protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000386439, Human)

Protein Percentage 78.28%
CDS Percentage 82.72%
Ka/Ks Ratio 0.34828 (Ka = 0.1521, Ks = 0.4368)

Sync ENSMUSG00000001333 (Mouse)

Gene Details

syncoilin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099659, Mouse)

Protein Percentage 72.49%
CDS Percentage 76.78%
Ka/Ks Ratio 0.21448 (Ka = 0.1951, Ks = 0.9095)

Sync ENSRNOG00000008118 (Rat)

Gene Details

syncoilin, intermediate filament protein (Sync), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010730, Rat)

Protein Percentage 71.46%
CDS Percentage 76.11%
Ka/Ks Ratio 0.24309 (Ka = 0.2131, Ks = 0.8767)

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location: 15833562..15823176   Strand: -
>XM_004850870.1
ATGGCCAGCCCGGAGTCCCGGAGTGCCGGGGACGGCGTAGCCCAGGCCTCGAGGGAAATAAGAGCAGAAGCCATTTCTCTTCAAGAGAATTCTGAACCCCTGAATGAGGCTGAGACCTTGAACCCAGAAGCTACTCTATCTTTGGAAGGGACTGTGAACCTGGAAGACATTCTCTACCTAGGGGACACAGGTGACTTCGAAGAGACACTTTACATGGAGGAGCCTGAGAGTCCAGAGGCGATACTGTATATTGAGGAGACTGGGCAGCCAGAGGCACTATTGGTGGAAGAGCCTGTGAGTGCAAGGGAGATGCAGTATGAGGAGACTGAGAAGCCAAATCTGGAACAGCCTGTGGATCTAGCAAAGAGCCTGAGCCCAGAGCAAATTGTCTGTGAGGGAGAGATGACTGAAAGGGAGGAAAAATCCAACCCTGAGGAGAACCTCAAACCTGAGCGGAGCCCCAGCCCAGAGGAGAACCTGAGCATTGAGGATCTGGAACTGCTAGAGGGCCGTTTCCAGCAGTGTGTGCAAGCAGTGGCCCAGCTGGAAGAGGAGCGGGATCAGCTCATCCATGAGCTGGTGCTGCTCCGAGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAGGACATCCTGGCTGCCTATAAGCTGCACGCGCAGGCAGAACTGGAGAGAGATGGGCTAAGGGAAGAGATCAGGCTGGTCAAGCAGAAGCTATTCAAGGTGACCAAGGAATGTGTGGCCTACCAGTACCAGTTGGAGTGCCGTCAGCAGGACGTGGCTCAGTTCACTGATTTCCGGGAAGTGCTGACCACAAAGGCAGCCCAGCTGTCTGGAGAACTGGCCCAACTCCAGGATGCCTATCAGAAGCAGAAGGAGCAGTTGAGGCAACAACTAGAAGAGCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAGAGCCGGCAGCTGTCTGCCCAGTTTGAACATCTTATGGCAGAGAGCCGCCAGGGCCTGGAGGAGGAATATGAGCCTCAGCTACTGCGGCTCCTGGAGAGGAAAGAATCGGGGACCAAAGCTCTGCAGAAAACCCAGGCTGAGATCCAGGAGATGAAGGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCAGCTCCACCTGCAAAAGAGGAACCTGGAGGACCAGATCATGCTTGTGAGGCAAAAACGAGATGAAGAAGTACAGCAGTACAGGGAACAGGAGGAGGAAATGGAGGAACGGAAGAGGAAGTTAAGAAGTGGGGTGCAACTCCAACAACAGAAGAACAAAGACATGGAGCAGCTGAGGATCAGTCTCGCACAAGAGCTCTCAAAATATAAGGGCTGTTTAGAACTGTATGGGAGAATCTGCAACACAGAAACAACCAAAAATACTTCCTAG

Related Sequences

XP_004850927.1 Protein

Sync PREDICTED: syncoilin isoform X3 [Heterocephalus glaber]

Length: 465 aa      View alignments
>XP_004850927.1
MASPESRSAGDGVAQASREIRAEAISLQENSEPLNEAETLNPEATLSLEGTVNLEDILYLGDTGDFEETLYMEEPESPEAILYIEETGQPEALLVEEPVSAREMQYEETEKPNLEQPVDLAKSLSPEQIVCEGEMTEREEKSNPEENLKPERSPSPEENLSIEDLELLEGRFQQCVQAVAQLEEERDQLIHELVLLREPALQEVQQVHQDILAAYKLHAQAELERDGLREEIRLVKQKLFKVTKECVAYQYQLECRQQDVAQFTDFREVLTTKAAQLSGELAQLQDAYQKQKEQLRQQLEEPPSQRDGHFLQESRQLSAQFEHLMAESRQGLEEEYEPQLLRLLERKESGTKALQKTQAEIQEMKEALRPLQAEARQLHLQKRNLEDQIMLVRQKRDEEVQQYREQEEEMEERKRKLRSGVQLQQQKNKDMEQLRISLAQELSKYKGCLELYGRICNTETTKNTS