Details from NCBI annotation

Gene Symbol Khdrbs1
Gene Name KH domain containing, RNA binding, signal transduction associated 1, transcript variant X1
Entrez Gene ID 101708086

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

KHDRBS1 ENSCPOG00000024148 (Guinea pig)

Gene Details

KH domain containing, RNA binding, signal transduction associated 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021243, Guinea pig)

Protein Percentage 99.77%
CDS Percentage 95.33%
Ka/Ks Ratio 0.00621 (Ka = 0.0011, Ks = 0.1755)

KHDRBS1 ENSG00000121774 (Human)

Gene Details

KH domain containing, RNA binding, signal transduction associated 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000313829, Human)

Protein Percentage 99.32%
CDS Percentage 93.68%
Ka/Ks Ratio 0.01412 (Ka = 0.0033, Ks = 0.236)

Khdrbs1 ENSMUSG00000028790 (Mouse)

Gene Details

KH domain containing, RNA binding, signal transduction associated 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066516, Mouse)

Protein Percentage 95.03%
CDS Percentage 89.77%
Ka/Ks Ratio 0.06356 (Ka = 0.0243, Ks = 0.3821)

Khdrbs1 ENSRNOG00000046794 (Rat)

Gene Details

KH domain containing, RNA binding, signal transduction associated 1 (Khdrbs1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066894, Rat)

Protein Percentage 95.03%
CDS Percentage 90.22%
Ka/Ks Ratio 0.07178 (Ka = 0.0253, Ks = 0.353)

Genome Location

Sequence Coding sequence

Length: 1332 bp    Location: 15244734..15275379   Strand: +
>XM_004850831.1
ATGCAGCGCCGGGACGACCCTGCCGCGCGGATGACCCGGTCCTCAGGCCGCAGCGGCTCCATGGACCCCTCAGGTGCCCACCCCTCGGTGCGTCAGACGCCATCTCGGCCTCCGCCGCTGCCTCACCGGTCCCGAGGAGGCGGAGGGGGCCCCCGAGGGGGCGCCCGGGCCTCACCAGCCACGCAGCCGCCACCATTGCTGCCTCCGTCGGCCACAGGTCCCGACGCGACAGTGGGCGGTCCAGCGCCTACCCCGCTACTGCCCCCCTCGGCCACAGCCTCAGTCAAGATGGAACCGGAGAACAAGTACCTGCCAGAACTCATGGCCGAGAAGGACTCCCTCGACCCGTCCTTTACTCACGCCATGCAGCTGTTGACTGCAGAAATTGAGAAGATTCAGAAAGGCGATTCAAAAAAGGATGATGAAGAGAATTACTTGGATTTATTTTCTCATAAGAACATGAAGCTGAAAGAGCGGGTACTGATACCTGTCAAACAGTACCCAAAGTTCAATTTTGTGGGGAAGATTCTTGGACCACAGGGGAATACAATCAAAAGACTGCAGGAAGAGACTGGTGCAAAGATCTCTGTGTTGGGAAAGGGTTCAATGAGAGACAAAGCCAAGGAGGAAGAGCTCCGCAAGGGTGGAGACCCCAAATATGCCCACTTGAATATGGATCTGCATGTCTTCATTGAAGTCTTTGGACCCCCATGTGAGGCTTATGCTCTTATGGCCCATGCCATGGAAGAAGTCAAGAAGTTTCTAGTACCAGATATGATGGATGATATCTGCCAGGAACAATTTCTAGAGCTATCGTACTTGAATGGAGTACCTGAGCCCTCTCGTGGACGTGGCGTGCCAGTAAGAGGCCGGGGAGCTGCACCTCCCCCTCCACCTGTTCCCAGGGGCCGTGGTGTTGGACCACCTCGAGGGGCTTTGGTGCGTGGTACCCCAGTGAGAGGTGCCATCACCAGAGGTGCCACTGTGACTCGAGGAGTGCCACCTCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCAGGCATCCAGAGAATACCCTTGCCTCCACCCCCTGCACCAGAAACATATGAAGAATATGGATATGATGATACATATGCAGAACAGAGCTATGAAGGCTACGAAGGGTATTACAGCCAGAGCCAAGGGGATTCAGAATATTATGACTATGGACATGGGGAGGTTCAAGATTCTTATGAAGCTTATGGCCAAGATGACTGGAATGGGACCAGGCCATCACTGAAGGCCCCTCCAGCTAGGCCAGTAAAGGGAGCATACAGAGAACACCCATATGGACGTTATTAA

Related Sequences

XP_004850888.1 Protein

Khdrbs1 PREDICTED: KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform X1 [Heterocephalus glaber]

Length: 443 aa      View alignments
>XP_004850888.1
MQRRDDPAARMTRSSGRSGSMDPSGAHPSVRQTPSRPPPLPHRSRGGGGGPRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHGEVQDSYEAYGQDDWNGTRPSLKAPPARPVKGAYREHPYGRY