Details from NCBI annotation

Gene Symbol Smpdl3b
Gene Name sphingomyelin phosphodiesterase, acid-like 3B
Entrez Gene ID 101709384

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMPDL3B ENSCPOG00000008773 (Guinea pig)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007875, Guinea pig)

Protein Percentage 86.06%
CDS Percentage 88.92%
Ka/Ks Ratio 0.24792 (Ka = 0.076, Ks = 0.3066)

SMPDL3B ENSG00000130768 (Human)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3B

External Links

Gene Match (Ensembl Protein ID: ENSP00000363001, Human)

Protein Percentage 74.07%
CDS Percentage 79.49%
Ka/Ks Ratio 0.29556 (Ka = 0.172, Ks = 0.582)

Smpdl3b ENSMUSG00000028885 (Mouse)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030709, Mouse)

Protein Percentage 74.78%
CDS Percentage 77.78%
Ka/Ks Ratio 0.19295 (Ka = 0.1625, Ks = 0.8425)

Smpdl3b ENSRNOG00000042326 (Rat)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3B (Smpdl3b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062762, Rat)

Protein Percentage 73.03%
CDS Percentage 76.97%
Ka/Ks Ratio 0.22858 (Ka = 0.1851, Ks = 0.8097)

Genome Location

Sequence Coding sequence

Length: 1374 bp    Location: 11785767..11807365   Strand: +
>XM_004850740.1
ATGAGGCTGCTCATGTGGCTGATTTTCCTGGCCCTCTGGGGAGTCGCCAGTGCTGAACCAGGGAAGTTCTGGCACATCTCTGACCTGCACCTGGACCCCAACTACACAGTATCCCAAGACCCCCATAAGGTGTGCCCCTCAGCTGGCGACCAGCTAGTGTACAACGCGGGCCCCTGGGGTGACTACCTCTGTGACTCTCCGTGGGCCCTCATCAACTCTTCCATCTATGCCATGAAGGAGATCGAGCCGAAGCCAGACTTCATTCTCTGGACGGGTGACGATACGCCACATGTGCCCAACGAGAACCTGGGAGAGGCGGCAGTGCTGGAAATTGTGGGACGTCTGACCAGCCTCATCAGGGAGGTCTTTCCAGATACTAAAGTCTATGCTGCTATGGGAAATCATGACTTTCACCCTAAAAGCCAGTTCCCAGCAAAGAGCAACAATATCTACCATCAGGTAGCAGAACTGTGGAGACCCTGGCTTAATAATGAATCTGTCGCTCTCTTCAAAGAAGGTGCCTTCTACTCGGAGTCGTTGCTAGATCCCAGCAGCCCGGGCCGAGTGGTGGTCCTCAATACCAATCTGTACTACAGCAACAATCGGCTCACGGCGGACCTGCCTGACCCCAGCCAGCAGTTCCAGTGGCTGGACGGGGTGCTGACCAACGCATCCCAAGCTGGGGAGATGGTCTACATCATTGGCCATGTGCCCCCGGGGTTCTTCGAGAAGACACGGAACAAGGCGTGGTTCCGGGAGGGCTTCAACAAGGAGTACTTGAAGCTGGTCCAGAAGCACCACAAAGTCATAGTGGGGCAGTTCTTTGGGCACCAACACACTGACAGCTTTCGGATGTTCTACAGTGATGCAGGTGAACCTATAAGCGTCATGTTCCTTGCCCCTGGAGTGACCCCGTGGAAAACCACGTTGGTTGGAGTGGTCAATGGGTCCAACAATCCAGGTATCCGGCTGTTTGAGTATGACCGAGCCACACTGAGCCTGCAGGATATGAGGACCTACTTCATGGACCTGCGCCAGGCGAATGTGCAAAACAACCCTCGCTGGGAGCTCGAGTACCGGGTGACTGAGGCCTATGGGGTGCCGAATGCAAGTGTCCATTCCATGCAAGCGGCAGCGACTGGCATTGCCAATGACCAGGACAAGCTGCAGCGCTACTATGTTTACAACTCTGTGAGCTACAACACTGCAGCCTGTGGCGAGACCTGCCGTATGGAGTTCTTGTGTGCCATGCAGGAAGTGGACTTCAATGCTTACTATACCTGCCTGAGCAACGCCGGTGCCAGGTCAGGGCTAGGAGCCTTGCTGGTCCTACTGGGCATGCTGCTAAGCCTGCATGTTCTGCTCAAACCCTAA

Related Sequences

XP_004850797.1 Protein

Smpdl3b PREDICTED: acid sphingomyelinase-like phosphodiesterase 3b [Heterocephalus glaber]

Length: 457 aa      View alignments
>XP_004850797.1
MRLLMWLIFLALWGVASAEPGKFWHISDLHLDPNYTVSQDPHKVCPSAGDQLVYNAGPWGDYLCDSPWALINSSIYAMKEIEPKPDFILWTGDDTPHVPNENLGEAAVLEIVGRLTSLIREVFPDTKVYAAMGNHDFHPKSQFPAKSNNIYHQVAELWRPWLNNESVALFKEGAFYSESLLDPSSPGRVVVLNTNLYYSNNRLTADLPDPSQQFQWLDGVLTNASQAGEMVYIIGHVPPGFFEKTRNKAWFREGFNKEYLKLVQKHHKVIVGQFFGHQHTDSFRMFYSDAGEPISVMFLAPGVTPWKTTLVGVVNGSNNPGIRLFEYDRATLSLQDMRTYFMDLRQANVQNNPRWELEYRVTEAYGVPNASVHSMQAAATGIANDQDKLQRYYVYNSVSYNTAACGETCRMEFLCAMQEVDFNAYYTCLSNAGARSGLGALLVLLGMLLSLHVLLKP