Details from NCBI annotation

Gene Symbol Stmn1
Gene Name stathmin 1, transcript variant X2
Entrez Gene ID 101702547

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STMN1 ENSCPOG00000011075 (Guinea pig)

Gene Details

stathmin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009955, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 97.32%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1285)

STMN1 ENSG00000117632 (Human)

Gene Details

stathmin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000410452, Human)

Protein Percentage 85.91%
CDS Percentage 86.58%
Ka/Ks Ratio 0.29603 (Ka = 0.1055, Ks = 0.3565)

Stmn1 ENSMUSG00000028832 (Mouse)

Gene Details

stathmin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030636, Mouse)

Protein Percentage 99.33%
CDS Percentage 89.49%
Ka/Ks Ratio 0.00497 (Ka = 0.0031, Ks = 0.6332)

Stmn1 ENSRNOG00000029091 (Rat)

Gene Details

stathmin 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046963, Rat)

Protein Percentage 83.56%
CDS Percentage 83.56%
Ka/Ks Ratio 0.1364 (Ka = 0.0938, Ks = 0.6874)

Genome Location

Sequence Coding sequence

Length: 450 bp    Location: 10000188..9996125   Strand: -
>XM_004850623.1
ATGGCTTCTTCTGATATTCAGGTGAAAGAACTGGAGAAACGTGCTTCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCGGTCAAAAGAATCTGTCCCAGATTTCCCCCTTTCTCCTCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAATTAGAAGCTGCAGAAGAAAGACGCAAGTCCCATGAAGCTGAAGTCTTGAAGCAGCTTGCTGAGAAACGAGAGCACGAGAAAGAAGTGCTTCAAAAAGCAATAGAAGAGAACAACAACTTCAGTAAAATGGCGGAAGAGAAACTGACCCACAAAATGGAAGCTAACAAAGAAAACCGAGAGGCACAAATGGCTGCCAAACTGGAGCGTTTGCGAGAGAAGGATAAACACATTGAAGAAGTACGGAAGAACAAAGAATCCAAAGATCCTGCTGATGAAACTGAAGCTGACTAA

Related Sequences

XP_004850680.1 Protein

Stmn1 PREDICTED: stathmin isoform X2 [Heterocephalus glaber]

Length: 149 aa      View alignments
>XP_004850680.1
MASSDIQVKELEKRASGQAFELILSPRSKESVPDFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHIEEVRKNKESKDPADETEAD