Sequence details NCBI ID: XM_004850537.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol C1qb
Gene Name complement component 1, q subcomponent, B chain
Entrez Gene ID 101704691

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

C1QB ENSCPOG00000008124 (Guinea pig)

Gene Details

complement component 1, q subcomponent, B chain

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007305, Guinea pig)

Protein Percentage 85.2%
CDS Percentage 88.4%
Ka/Ks Ratio 0.27877 (Ka = 0.0824, Ks = 0.2955)

C1QB ENSG00000173369 (Human)

Gene Details

complement component 1, q subcomponent, B chain

External Links

Gene Match (Ensembl Protein ID: ENSP00000313967, Human)

Protein Percentage 81.27%
CDS Percentage 83.93%
Ka/Ks Ratio 0.20964 (Ka = 0.1094, Ks = 0.5218)

C1qb ENSMUSG00000036905 (Mouse)

Gene Details

complement component 1, q subcomponent, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040246, Mouse)

Protein Percentage 80.48%
CDS Percentage 80.74%
Ka/Ks Ratio 0.12276 (Ka = 0.1036, Ks = 0.8438)

C1qb ENSRNOG00000012749 (Rat)

Gene Details

complement component 1, q subcomponent, B chain (C1qb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017060, Rat)

Protein Percentage 80.08%
CDS Percentage 81.14%
Ka/Ks Ratio 0.14191 (Ka = 0.1069, Ks = 0.7533)

Genome Location

Sequence Coding sequence

Length: 762 bp    Location: 7377072..7382953   Strand: +
Raw sequence   
>XM_004850537.1
ATGAAGACCCCATGGGGTGACATCTCAGCACAGCTGCTGCTGCTGCTGCTGCTCTTAGCTCTGCTCCATGTCTCCTGGGCCCAGAGCAGCTGCACTGGGCACCCAGCCATCCCTGGCATCCCTGGCATCCCTGGGATACCTGGCTCTGATGGTCAACCTGGGACCCCAGGAACCAAAGGAGAAAAAGGGATCCCAGGGCTAGCTGGAGACCATGGTGAGTTTGGAGAGAAGGGCGACCCAGGGATTCCTGGGAATCCAGGAAAAGTTGGTCCCAAGGGCCCCATTGGCCCAAAAGGTACCCCAGGTCCCCCTGGAGGCCCTGGTCCCAAGGGTGAATCTGGAGACTACAAGGCCACGCAGAAAGTAGCCTTCTCTGCCTTGAAGACCCTCAACACTCCCCTGAGACAAAAGCAAGCCATCCGCTTCGACAACGCGATCACCAATGTGAACAGGAACTATGAGCCTCGCAATGGCAAGTTCACGTGCCAGGTGCCAGGTCTCTACTACTTCACCTACCACGCCAGCTCTCGTGGGAACCTGTGTGTGAACCTCGTCCGGGGCCGGGAGCAGCCCCAGAAGGTGGTCACCTTCTGCGACTATACCCAAAACACCTTCCAGGTCACCACAGGCAGTGTGGTGCTCAAGCTGGACCAGGGGGAGATGGTCTACCTAGAGGCCACTGACAAGAACTCCCTGCTGGGCATGGAGGGGGCCAACAGCATCTTCTCAGGCTTCCTCCTCTTCCCAGATGTGGAGGTGTGA

Related Sequences

XP_004850594.1 Protein

C1qb PREDICTED: complement C1q subcomponent subunit B [Heterocephalus glaber]

Length: 253 aa      View alignments
>XP_004850594.1
MKTPWGDISAQLLLLLLLLALLHVSWAQSSCTGHPAIPGIPGIPGIPGSDGQPGTPGTKGEKGIPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPIGPKGTPGPPGGPGPKGESGDYKATQKVAFSALKTLNTPLRQKQAIRFDNAITNVNRNYEPRNGKFTCQVPGLYYFTYHASSRGNLCVNLVRGREQPQKVVTFCDYTQNTFQVTTGSVVLKLDQGEMVYLEATDKNSLLGMEGANSIFSGFLLFPDVEV