Sequence details NCBI ID: XM_004850375.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Crocc
Gene Name ciliary rootlet coiled-coil, rootletin, transcript variant X2
Entrez Gene ID 101718332

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CROCC ENSCPOG00000007674 (Guinea pig)

Gene Details

ciliary rootlet coiled-coil, rootletin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006913, Guinea pig)

Protein Percentage 90.38%
CDS Percentage 90.2%
Ka/Ks Ratio 0.09607 (Ka = 0.0473, Ks = 0.4922)

CROCC ENSG00000058453 (Human)

Gene Details

ciliary rootlet coiled-coil, rootletin

External Links

Gene Match (Ensembl Protein ID: ENSP00000364691, Human)

Protein Percentage 86.6%
CDS Percentage 86.57%
Ka/Ks Ratio 0.07766 (Ka = 0.0689, Ks = 0.8875)

Crocc ENSMUSG00000040860 (Mouse)

Gene Details

ciliary rootlet coiled-coil, rootletin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099549, Mouse)

Protein Percentage 81.49%
CDS Percentage 82.09%
Ka/Ks Ratio 0.07707 (Ka = 0.1046, Ks = 1.3568)

Crocc ENSRNOG00000008334 (Rat)

Gene Details

ciliary rootlet coiled-coil, rootletin (Crocc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011115, Rat)

Protein Percentage 82.03%
CDS Percentage 82.18%
Ka/Ks Ratio 0.07549 (Ka = 0.1006, Ks = 1.3332)

Genome Location

Sequence Coding sequence

Length: 6009 bp    Location: 2567316..2604992   Strand: +
Raw sequence   
>XM_004850375.1
ATGAACCTGGGGCTGGCGGGATCGCTGGAGGCCCAGCTGGGACTGGAGACGGTTATTCAGACCCTGGAGAGCAGCCTCCTTGGGCCAGGCCAGGAGAAAGGTCTACTCGTGCAGGACCCAGCCCGGGGCTCTGGACTCGGCAGCCTGCCCGCCCAGATCAGGGAGATTGTCACCCGAAACTTCTCCCAGCCTGGGAGCCCAGTTGCACTGCCTGCCCTGGAGATGGCATCGCTGCTGTCACTGCAGGAAGAGAACCAGCTGCTGCAGCAGGAGCTGTCCCGTGTGGAGGACCTGCTGGCCCAGAGCCGCGCAGAGCGCGATGAGCTCGCCATTAAGTACAATGCAGTTAGCGAGAGGCTGGAGCAGGCGATGCAACTGGAGTCTGGGGAGCTGGAGACTCAGGAGCCCAGGGGGCTGGTTCGGCAGAGTGTGGAGCTGCGGAGGCAGCTTCAGGAGGAGCAGGCCTCCTACCGGCGAAAGCTGCAGGCCTACCAGGAGGGCCAGCAGCGGCAGGCCCAGCTAGTGCAGAGGCTGCAGGCCAAGATTCTCCAATACAAGACCAAGTGCTCAGAGCTGGAGCAGCAGCTGCTGGAGCGGTCCACGGAGCTGGAACGGCAGCGGCTGAAGGACATGGAGCACAGCCAAGACCTGGAGAGTGCCCTCCTCCGCCTGGAGGAGGAACAGCAGAGAAGCGCCAGCCTGGCCCAGGTGAATGCCATGCTGAGAGAACAGCTGGACCAGGCAGGCTCAGCCAACAAGGCTCTGAGTGAGGACATACGAAAGGTGACCAGCGACTGGACACGCAGCTGCCAGGAGCTGGAGCAGCGGGAGGCGGCGTGGAGGCATGAGGAAGAGTCCTTCAATGCCTACTTCAGCAGCGAGCACAGCCGCTTGCTGCTCCTCTGGAGACAAGTTGTGGGGCTCCGGCGGCTGGTCAGCGAGGCGAAGCTGTACACAGAGAGGGACCTGCTGCAGCTTGGAGGGGAGCTGACCCGGACATCACGAGCTGTGCAGGAGGCCAGCCTGGGGCTGAGTGCTGGCCTGAAGCTGGCTGAGAGCCGGGCTGAGGCGGCTCTGGAAAAGCAGGCACTGCTGCAGGGACAGCTGGAGAAACAGCTGCGGGACCAGGTGCTCCGTGAGAAGGACCTGACCCAGCAGCAGGCACAGAGCGACCTGGACAAAGCCAACCTCAGCACCCGCATGACAGAGCTGGCCCTGGCAGTGGAGCACCTTCAGAGCCAGAACCTGGAGAAGGATCGGTTCAGCAAGGCCCTGGCAGAGAAGCTGGAGGCCCTGGAGTCTCTGCGGCTACAGGAGCAGGTGGCCCTGGAGACCGATGACAGAGAGGGGCTGCAGCAGACCCTGAGGGACCTGGCACAGGCCGTCCTGTCCGATCCTGAGAGTGGCGTCCAACTCAGCGGCTCTGAGCGCACGGCCGATGCCTCCGATGGCAGCCTGCGGGGGCTGTCAGGCCCGCGGACACCATCCCCACCGCGCCGCTCCTCCCCCGGCCGTGGCCGTTCTCCCCGCCGAGGCCCATCCCCAGCCTGCTCAGACTCCTCCACGCTTGCCCTCATCCACTCTGCCCTGCACAAGCGCCAGCTACAGGTCCAGGACATGCGTGGTCGCTACGAGGCGAGCCAGGAACTGCTCGGCACCCTGCGGAAGCAGCTCAGTGACAGCGAGAGTGAGCGGTGTGCCCTGGAGGAGCAGCTGCAGAGCCTGCGCCTCAAATCGGAGGGAGCCGCCCAAGCCCACGAGGATGCCCAGCGTGAGGCCCAGCGACTTCGCAGTGCCAATGAGCTCCTAAGCAGGGAGAAGGGCAGCCTGGCCCAGAGCCTGCAGGTGGCCCAGCAGCAGGCCGAGGAGCTACGGCAGGAGCTGGAGAAGCTGCAAGCTGCCCAGGAGGAGCTGCAGCGGCAGCGGGACCGGCTGGAGGAAGAGCAGGAGGACATGGTGCAGGATGGCGCCCGGGCCCGCAGGGAGCTGGAGCGCAGCCACAGACAGCTGGAGCAGCTAGAATTGAAGCGCTCGGGGCTGGCGAAGGAGCTGGTGGAGGTGCGGGAGGCACTGGGTTGTGCCTGCCTGCAGCGGGATGTGCTGCAGGCTGAGAAGGCCGAGGTGGCTGAGGTGCTAACCAAGGCAGAGGCCGGCCGAGTGGAGCTTGAGCTGTCCATGACCAAGCTGAGGGCCGAAGAGGCCTCTCTTCGGGACTCCTTGTCCAAGCTGAGTGCCCTCAACGAGAGCCTTGCCCAGGACAAGCTGGGGCTGAATCACCTCATCGCCCAGCTGGAGGAGGAGAAGGCCACCTTGCTGGGGAGGCAGCGGCAGGCGGAGCATGAAGCCTCCTCGGCTCTGGAGGAGCAGCAGCGGCTGGAGCAGCTTCGGCTGGAACAGGAAGTGGAGCAGCAGGGCCTGGAGGGCTCCCTGCACTCAGCTGAACAGGCCCGGGTTGCACTGGAGCAGCAGCTTCTCATGCTGCGTGATGAACGCAGCTGGCTGCAGGAGCAGCTGGCTCAGCTCTCGAGACAGCTGAGCGGGCGGGAGCAGGAGCTGGAGCAGGCCCAGCGGGAGTCGCAACAGCAGGTGGAGGCACTGGAGCGAGCAGCCCGGGAGAAAGAGGCGCTGGCCAAGGAGCGGGCCAGTCTGGTTGTGCAGCTAGCGGCGGCGGAGCGTGAAGGCCGGACCCTGTCAGAGGAGGCCACACGCCTGCGCTTGGAGAAGGAGGCCCTGGAGAGCAGCCTGTTTGAGGTGCGAAGGCAGCTGGCTCAGCTCGAGGCCCGCCGAGAGCAGCTGGAAGCTGATGGACAGGCCCTGCTGCTGGCCAAGGAGACCCTGGCCGGGGAGCTGGCAGCCCTGCGGCGGCAGATGACAACTACAGAGGAGAAAATAGCTCTGGACAAGGAGCTCATGGCCCAGAAGCTGGCGCAGGCTGAGCGGGAGGCCCAGGCCTCTCTGCGGGAGCAGCGGGCAGCCCACGAAGAGGACCTGCAACGACTCCAGAGAGAGAAGGAGGTGGTCTGGCGGGAGCTGCAAGCAGAGCGGGCCCAGCTGCAGGGCCAACTGCAGCGTGAGCGGGAGGAGCTGCTGGCCCGGCTGGAGGCTGAGAAGGAGGAGCTGAGTGAGGAGATTGCTGCCCTTCAGCAGGAGCGTGATGAGGGCCTGCTCCTGGCTGAGAGTGAGAAGCAGCAGGCCCTGTCCCTAAAGGAGTCTGAGAAGACAGCGCTGTCAGAGAAGCTGATGGGGACACAGCACAGCCTGGCTGCCATCTCCCTGGAGATGGAGCGGCAGAAGCGAGATGCCCAGAGCCGGCAGGAGCAGGACCGGAGCACCATGAATGCCCTGATGTCTGAACTTCGGGACCTCCGGGCCCAGTTTGAGGAGGCTGCTGCAGCCCATGCCCAGGAAATGCAAAGACTGCAGGAGCAGGCCCGGGACCTGAGCAGGCAGCGGGAGTCCTGCCTACTCGAGGCAGAAGAGCTTCGGACTCAAATGCGCCTGCTAGAGGACGCACGGGACGGGCTTCGGCGGGAGCTGCTGGAGACCCAGCGCAAGGTGCGTGACAGCCAGGAGGGCCGAGAGGCCCAGCGCCAGGAGGCCAGCGACCTGCGGCGCAGTCTGAGCGAGGGTGCCATGGAGCGCGAGGCCCTGCGGCGCTCCAATGAGGAGCTGCGGGTGGCCGTGAAGAGGGCTGAGAGCGAGCGCATCAGCCTGAAGCTTGCTAAGGAGGACAAGGAGCAGAAGCTGGCGCTCCTGGAGGAGGCTCGGGCAGCCATGGGCAAGGAGGCTGGGGAGCTGCGCGCAGGGCTGCAGGAGGTAGAGCGCTCGAGGCTAGAAGCGCGACGGGAGCTGCAGGAGCTGCGGAGGCAGATGAAGACGCTGGACTGTGAGAATGCCAGGCTGGGCCAGGAGCTAGCAGAGCTGCAGGGCCGCCTGGCCTTGGGGGAGCGGACAGAGAAGGAGAGCCGGAGGGAGGCCCTGGGCCTTCGGCAGAAGCTGCTGAAGGGCGAAGCCAGCGTGGAGGCCACAAGGCAGGAGCTCCAGGGATGCCAGCGGAAGCTGCAGGAACAGGAGGCCGAGTTCCGGGCCCGAGAGCGCGGCCTGCAGGGCTCCCTGGAGGAGGCGCGAAGCGTGGAGAAGAAGCAGCTGGACCACGCCCGCGGCCTGGAGCGCAAGCTGGAGGCAGCTCGGGCAGAGGCCGCAGAGCTGGCGCTGCGGCTGAGCGCGGCCGAGGGCCGGACGCAGGGCCTGGAGGCAGAGCTGGCCCGCGTTGAGGCGCAGCGGCGCGCGGCCGAAACCCAGCTGGGCGGCCTGCGCTCCGCCCTGCGCCGGGGCCTGGGCCTGGGCCGCGCGCCCGGCTCCCCCACACACAACTCGCCGGCGGGAGCAGATGGAGGAGGGCTCAGCAGCCCCAGCCCCTTGGAACGCAGTGCTGGGTCCCAGCCACCATCCCCAGGACCTGCCACGTCACCAGGTCCTCCAGACCTAGACCCAGAGGCAGTGCGAGGGGCCCTCCGGGACTTCCTGCAGGAGCTGCGGGGTGCCCAGCGAGAGCGGGATGAACTCCAGGCCCAGACCAGCGGCCTCAGTAGACAGCTGGCCGAGATGGAGGCTGAGAGGGACAGCGCGACTTCATGGGCCAGGCAGCTGCAGAAGGCAGTGGCTGAGAGCGAGGAAGCCCGGCGCAGTGTGGACGGGCGGCTGAGCGAGGCCCAGGCGGAGCTGGCGCTGCAGGAGGAGAGCCTGCGGCGCAGTGAACGGGAGCGCAGGGCCACACTGGACCAGGTGGCCACCCTGGAGAGGAGCTTGCAGGCCACCGAGAGTGAGCTCCAGGCCAGCCAGGAGAAGATCAGCAAGATGAAGGCCAATGAGGCCAAGCTGGAGAGTGACAAGCGGCGCCTGAAGGAGGTGCTGGATGCCTCCGAGAGCCGCACCATCAAGCTGGAGCTGCAGCGGCGAGCGCTTGAGGGAGAGCTGCAGCGGAGTCGCCTGGGCCTCAGTGACCGAGAGGCCCATGCCCAGGCCCTGCAGGATCGGGTGGACTCCTTGCAGAGACAGGTGGCTGACAGTGAGGTGAAGGCAGGGACCTTGAGGCTGACAGTGGAGCGGCTGAATGGGGCCCTGGCCAAGGTGGAAGAGAGCGAAGGGGTCTTGCGGGACAAAGTACAGAGCCTGACACAGGCCCTGGCCCAGAGCAACACCAGCCTTACCAGTACCCAGGACAAGAACCTACAGCTGCAGAAGGCGCTAACAGCCTGTGAGCATGACCGCCAGGTGCTCCAGGAACGGCTGGACGCTGCCCGGCAGGCACTGTCAGAAGCTCGGAAGCAGAGCAGCTCCCTGGGTGAGCAGGTGCAGATGGTTCGGGGCGAGCTGGCCGACCTGGAGCTGCAGCGCTCAGAGGCAGAGGGCCAGTTGCAACAGCTGCAGGAGGTGCTACGGCAGCGGCAAGAGAGTGAGGCTGCAGCACTGCACACGGTGCAGAAGCTGCAGGATGAGCGGCGGCTGCTGCAGGAGCACCTGGGCAGCCTGCAGAGAGCCCTGGCCCAGCTGGAAGCCGAGAAGCGGGAGGTGGAACGCTCTGCCCTTCGGCTAGAGAAGGACCGCATGGCCCTCAGGAGGACACTGGACAAGGTGGAGCGGGAGAAGCTTCGAAGCCATGAGGACACGGTGCGGCTGAGCGCAGAGAAGGGACGCCTGGACCGCTCGCTCACTGGGGCTGAGCAGGAGCTGGCCAAGGCCCAGAGGCAGATCCAGCAGCTGGAGGCCCAGGTGGTGGCCCTGGAGCAGAACCACAGCCCAGCCCAGCTGGAGGCAGAGAAGCAGCAGCAGCAGCAGCTGGAGCTGCAAGAGGTGGGAAGCCTGTGCAGTACCCAGGTGCAGACTCAGCATACCCACTGCCAGCGGGTCCAGGGGCTGGAGGAGCAGGTGTCCACACTGAAGGGGCAGCTGCAGCTTGGAAGGAGCTCAGCGTCCTTCTCCCCACCCTCTGGCCCCCCCAAGAAATGA

Related Sequences

XP_004850432.1 Protein

Crocc PREDICTED: rootletin isoform X2 [Heterocephalus glaber]

Length: 2002 aa      View alignments
>XP_004850432.1
MNLGLAGSLEAQLGLETVIQTLESSLLGPGQEKGLLVQDPARGSGLGSLPAQIREIVTRNFSQPGSPVALPALEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERLEQAMQLESGELETQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQAKILQYKTKCSELEQQLLERSTELERQRLKDMEHSQDLESALLRLEEEQQRSASLAQVNAMLREQLDQAGSANKALSEDIRKVTSDWTRSCQELEQREAAWRHEEESFNAYFSSEHSRLLLLWRQVVGLRRLVSEAKLYTERDLLQLGGELTRTSRAVQEASLGLSAGLKLAESRAEAALEKQALLQGQLEKQLRDQVLREKDLTQQQAQSDLDKANLSTRMTELALAVEHLQSQNLEKDRFSKALAEKLEALESLRLQEQVALETDDREGLQQTLRDLAQAVLSDPESGVQLSGSERTADASDGSLRGLSGPRTPSPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQELLGTLRKQLSDSESERCALEEQLQSLRLKSEGAAQAHEDAQREAQRLRSANELLSREKGSLAQSLQVAQQQAEELRQELEKLQAAQEELQRQRDRLEEEQEDMVQDGARARRELERSHRQLEQLELKRSGLAKELVEVREALGCACLQRDVLQAEKAEVAEVLTKAEAGRVELELSMTKLRAEEASLRDSLSKLSALNESLAQDKLGLNHLIAQLEEEKATLLGRQRQAEHEASSALEEQQRLEQLRLEQEVEQQGLEGSLHSAEQARVALEQQLLMLRDERSWLQEQLAQLSRQLSGREQELEQAQRESQQQVEALERAAREKEALAKERASLVVQLAAAEREGRTLSEEATRLRLEKEALESSLFEVRRQLAQLEARREQLEADGQALLLAKETLAGELAALRRQMTTTEEKIALDKELMAQKLAQAEREAQASLREQRAAHEEDLQRLQREKEVVWRELQAERAQLQGQLQREREELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTQHSLAAISLEMERQKRDAQSRQEQDRSTMNALMSELRDLRAQFEEAAAAHAQEMQRLQEQARDLSRQRESCLLEAEELRTQMRLLEDARDGLRRELLETQRKVRDSQEGREAQRQEASDLRRSLSEGAMEREALRRSNEELRVAVKRAESERISLKLAKEDKEQKLALLEEARAAMGKEAGELRAGLQEVERSRLEARRELQELRRQMKTLDCENARLGQELAELQGRLALGERTEKESRREALGLRQKLLKGEASVEATRQELQGCQRKLQEQEAEFRARERGLQGSLEEARSVEKKQLDHARGLERKLEAARAEAAELALRLSAAEGRTQGLEAELARVEAQRRAAETQLGGLRSALRRGLGLGRAPGSPTHNSPAGADGGGLSSPSPLERSAGSQPPSPGPATSPGPPDLDPEAVRGALRDFLQELRGAQRERDELQAQTSGLSRQLAEMEAERDSATSWARQLQKAVAESEEARRSVDGRLSEAQAELALQEESLRRSERERRATLDQVATLERSLQATESELQASQEKISKMKANEAKLESDKRRLKEVLDASESRTIKLELQRRALEGELQRSRLGLSDREAHAQALQDRVDSLQRQVADSEVKAGTLRLTVERLNGALAKVEESEGVLRDKVQSLTQALAQSNTSLTSTQDKNLQLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQMVRGELADLELQRSEAEGQLQQLQEVLRQRQESEAAALHTVQKLQDERRLLQEHLGSLQRALAQLEAEKREVERSALRLEKDRMALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRSLTGAEQELAKAQRQIQQLEAQVVALEQNHSPAQLEAEKQQQQQLELQEVGSLCSTQVQTQHTHCQRVQGLEEQVSTLKGQLQLGRSSASFSPPSGPPKK