Sequence details NCBI ID: XM_004850316.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prdm2
Gene Name PR domain containing 2, with ZNF domain, transcript variant X2
Entrez Gene ID 101699822

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRDM2 ENSCPOG00000014509 (Guinea pig)

Gene Details

PR domain containing 2, with ZNF domain

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013075, Guinea pig)

Protein Percentage 91.28%
CDS Percentage 90.59%
Ka/Ks Ratio 0.17073 (Ka = 0.0464, Ks = 0.2717)

PRDM2 ENSG00000116731 (Human)

Gene Details

PR domain containing 2, with ZNF domain

External Links

Gene Match (Ensembl Protein ID: ENSP00000235372, Human)

Protein Percentage 88.38%
CDS Percentage 86.97%
Ka/Ks Ratio 0.15095 (Ka = 0.0653, Ks = 0.4329)

Prdm2 ENSMUSG00000057637 (Mouse)

Gene Details

PR domain containing 2, with ZNF domain

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101404, Mouse)

Protein Percentage 84.31%
CDS Percentage 83.65%
Ka/Ks Ratio 0.16406 (Ka = 0.0903, Ks = 0.5505)

Prdm2 ENSRNOG00000033522 (Rat)

Gene Details

PR domain containing 2, with ZNF domain (Prdm2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046011, Rat)

Protein Percentage 84.38%
CDS Percentage 82.99%
Ka/Ks Ratio 0.14705 (Ka = 0.09, Ks = 0.6121)

Genome Location

Sequence Coding sequence

Length: 5019 bp    Location: 276893..353666   Strand: +
Raw sequence   
>XM_004850316.1
ATGAATCAGAACGTTCCTGAGCCTGTGGCAGCCACTGAGATCCTGGCTGAGGTACCTGAACATGTGCTTCGAGGACTTCCAGAGGAAGTGAGACTTTTCCCATCTGCTGTTGACAAGACCCGTATCGGTGTCTGGGCCACTAAACCTATTTTAAAAGGCAAAAAGTTTGGGCCATTTGTTGGTGATAAGAAAAAAAGATCTCAGGTTAAGAATAATGTGTACATGTGGGAGGTATATTATCCGAATTTGGGATGGATGTGCATTGATGCCACTGATCCAGAGAAGGGGAACTGGCTTCGATATGTGAATTGGGCTTGCTCGGGAGAAGAACAAAACTTATTTCCCCTGGAAATCAACAGAGCCATTTACTATAAAACTTTAAAGCCAATCGCGCCTGGCGAGGAGCTCCTGGTCTGGTACAATGGGGAAGACAACCCCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGAAACAAGCGGAGCTCGCCCAAGAGCCGGAAAGGGAAGAAAAAATCCCAGGAAAATAAAAACAGAGGAAACAAACCCCAAGGCATACAGCTGAGGAGAAGTGAGCCAGATTCCACCCCTGCAAATATGAGAGATTCTGCAGAAGGTCCTAAACAAGAAGAGAGGCCTTTGGCTGAAGCACCCGAGCAGCCAAGTGTTCCGCAGGAAGTGGTCAGCCAGGACGTGGTTCCACAGCTGCTGATCCCTCCTCCTGCCTGTGAGCCCCAGCCAGATCCAGAAGGGAAACAGGAAGCTGCAGACTGTGAGGCAAATGATCTGGAGGAAGAGGAAGAGGAAGAAGATGATGATGATGATGATGATGATGATGATGAGTTGGAAGAAGAAGGGGAGGAAGAAGCTGACATGCCAAATGAAAGTTCTGTCAAAGAGCCAGAAATACAATGCGATGAGAAGCCGGAGGATTTATTAGAAGAAACAAAAAGCATTTCAAATGAAACTCCTGAAGACTCTTCTGAAGTAACTCCAGTCATTAAGATCCCTGCAACTAAAGATGAGGCCAATGGTGAGGTATTTGAAACGTTTATGTTTCCATGTCAGCATTGTGAAAGGAAATTTAGCACCAAGCAGGGGCTGGAACGCCACATGCATATCCACATGTCTGCAGTCCATCATGCTTTCAAATGCAAGTATTGTGGGAAAGCATTTGGCACACAGATTAACCGGAGACGGCATGAGCGTCGCCACGAAGCAGGGCTAAAGCGAAAACCCAGTGCAACAGTGCAGCCATCCGAGGACCTAGCTGATGGCAAAGGTTCTGTGGAAAATGTTGGTCCTAAAAATGAATTGAAGCCTCCCCATCTTGGACAGTACTACCTGATCTCAAACTCAGAGAAAGCTTCTCAAGAAACAGCAAATCCTTCTGTTGTAGAAGAGAATGGAGAAGTGAAGGAACTTCATCCATGCAAATATTGCAAGAAGGTGTTTGGCACTCACACTAATATGAGACGGCATCAGCGCAGAGTTCATGAACGCCACCTGATTCCCAAAGGTGTCCGGCGGAAAGGTGGCCTCCTTAATGAGCCACAGCCTCCTGCAGAGCAGGCCCAGCCCACCCCAAATGTCTATGTACCAAGCACAGAGCCAGAGGAGGAAGGGGAAGCAGATGATGTGTACATCATGGACATTTCTAGCAATATCTCTGAAAACTTAAATTATTACATTGATGGCAAGATTCAAACCAACAACAACACTAGTAACTGTGATGTGATTGAAATGGAGTCTAATTCAGCAGACTTGTATGGTATAAATTGTCTACTCACTCCAGTTACAGTGGAAATTACTCAAAATATAAAGACCACACCAGTCCCTGTAACAGATGACCTTTCTAAAGAGCCTTCCAGCAGTACAAACTGTGAGTCCAAGAAACGGAGGACTGCAAGTCCACCTGTGCTCCCCAAAATTAAAGCTGAAACGGATTCTGACCCCACTGTACCCTCCTGTTCCTTAAGCCTGCCTCTTAGCATATCGACAACGGAGGCCGTGTCTTTCCCTAAAGAGAAGAGTGTTTATTTGTCATCAAAGCTCAAACAGCTTCTTCAAACCCAGGACAAGCTGGCACCTCCTGTAGGGATTTCAGCATCTGAAATCCCCAAGTTAGGTCCTGTGTGTGTGTCTGCACCTGCATCCATGTTAGCCATTACCTCGAGCAGGTTTAAGAGGCGGACCAGCTCTCCACCCAGTTCTCCGCAGCACAGCCCCGCCCTTCGAGACTTTGGGAAGCCGAGTGATGGGAAAGCTATGTGGTCAGACACAGTGCTCACTTCCAAGAAACCCAAGTTAGAACGTCATAGCGACTCGCCCTCCTGGAGCTTGTCTGGGAGAGAGGAAAGAGAAACTAGGACCCCTCCTTGCTTTGATGAATATAAAATATCAAAAGACTGGGTGACCAGCTCTACTTTCAGCAATGTGTGCAACCAACAACCACTGGATTTATCCAGCGGAGTCAAACAGAAGGCTGAGGGGGCAGGCAAGACTCCGGTCCAGTGGGAATCTGTATTAGATCTCAGTGTGCATAAAAAGCATTGTAGTGACTCCGAAGGCAAGGAATTCAAAGAAAATCATTCAGCTCAGCCAACCTGTAGCACTGTAAAGAAAAAGAAACCAACCACCTGCATGCTACAAAAGGTCCTTCTCAATGAATATAATGGCATCAATTTACCTGTAGAAAGTACTCTTGATGTGACCAGGAGCCCAAGCCCTTGTAAATCTCTAGATACCCATCCAGATTCTGACCTTGGTTCTGACTCTCACTTCTCTGCTCCTACTGCTGAGTCCCCCCCTGCAGTGTGTCCTTCATCACCCGCCTTGCAGACACCCTCCTTGTCGTCCAGTCAACTACCACCTTTCTTGATTCCCACAGATCCCCCGTCCCCTCTGGCATGCCCTCCTGTGTTAACTGTTGCCACTCCGCCCCCTCCCCTCCTCCCAACAGTCCCTCTTCCTGCCCCATGTGCCAGTGCTTCTCCTCAACACTGTCCCTCTCCACTCTCAAGTGCGACCGCCCAGTCTCCACTTCCAATTCTCTCCCCAACTGTGTCACCCTCACCCTCTCCTGCTCCTCCTGTGGAGCCGCTCTTGTCTGCTGCTTCACCTGGGCCTCCAACACTTTCTTCTTCCTCTTCCTCCTCCTCCTCTTCATTCTCTTCCTCATCCTCATCTCCTTCACCACCCCCTCTCTCGGCAGTGTCATCTGTGGTGTCCTCTGGTGATAATCTGGAGGCTTCTCTCCCTGCAATAACTTTTAAACAGGAGGAACTAGAGAATGAAAGCCTGAAGCCCCAGGAGGAGCCCCAGTCTGCAGTCGAGCAGGATATTATTCAGGAAACATTCAGCAAAAACTTTGTCTGCAATGTCTGTGAATCACCTTTTCTTTCCATTAAAGACCTAACCAAACATTTATCTGTTCATGCTGAGGAATGGCCCTTCAAATGTGAATTTTGTGTGCAGCTTTTTAAGGCTAAATCTGATCTGTCAGAACATCGTTTTTTGCTTCATGGAGTTGGGAATATCTTTGTGTGTTCCATTTGTAAAAAAGAATTTGCATTCTTGTGCAATTTGCAGCAACACCAGCGAGATCTGCACCCAGATGAGGTATGTACACACCATGAGTTTGAAAGCGGGACACTAAGGCCCCAGAACTTTACAGACCCGAGCAAGGCCCAGATGGAGCATATGCAGGGCTTGCCAGATGATCCTTTGGAAACTTCCAAAGAAGAGGAAGAATTGAACGATTCCTCTGAAGAGCTTTATACCACCATAAAAATAATGGCTTCTGGAATAAAGACAAAAGAGCCAGATGTTCGATTGGGTCTCAATCAGCATTACCCAAGCTTTAAACCACCTCCATTTCAGTATCACCACCGAAACCCCATGGGTATTGGTGTGACAGCCACAAATTTCACTACCCACAATATTCCACAGACTTTTACTACTGCCATTCGCTGCACAAAATGTGGGAAAGGTGTTGATAACATGCCTGAGTTGCACAAACATATCCTGGCGTGTGCTTCTGCGAGTGACAAGAAGAGGTATACCCCTAAGAAAAATCCAGTACCATTGAAACAAACCGTGCAACCCAAAAATGGAGTGGTGGTTTTGGACAACTCGGGGAAAAATGCCTTCAGACGAATGGGACAGCCCAAAAGACTGAACTTCAGTGTTGAGCTCAGCAAAATGTCACCAAATAAGCTCAAATTAAGTGCATTGAAGAAAAAAAATCAGCTTGTACAGAAAGCGATCCTTCAAAAAAACAAATCTGCAAAGCAGAAGGCCGACTTGAAAAATGCTTCTGAGTCGTCTCACATCTGCCCGTACTGTAACAGAGAGTTCACTTACATTGGGAGCCTGAATAAACATGCTGCTTTTAGTTGTCCCAAAAAGCCCCTTTCTCCTTCCAAAAGAAAGGTTTCTCATTCAGCCAAGAAAGGTGGATACATGTCACTTGCAAGTAGTGACAAAAACAGTAGCAACCACCGCAGACGGACAGCAGATGCGGAGATTAAGATGCAGAGCTCGCAGATGCCTTTGGGCAAGACCAGAGCTCGAAGCTCAGGCCCTGTTCAAGCCCCTTTGCCCTCCTCGTCCTTCAGGTCCAAGCAGAATGTCAAATTTGCAGCTTCAGTCAAATCCAAAAAGCCAAGTTCCTCCTCTTTAAGGAACTCTAGTCCTATACGAATGGCCAAAATAACTCATGTGGAAGGGAAAAACCCCAAAGTTGTGGCCAAGAATCATTCTGCTCAGCTCTCAAGCAAAACTTCCCGGAGCCTGCATGTGAGAGTACAGAAAAGCAAAGCTGTTTTACAAAACAAGTCCACTTTGGCGAGTAAGAAAAGAACAGACCGGTTCAGTGTAAAATCTAGAGAACGGAGTGGGGGCCCAATCACCCGAAGCCTTCAGCTGGCAGCTGCTGCGGACCCAAATGAAAGCAGAAGAGAAGACAGCAGTGCCAAGCAGGAGCTGAAGGACATCAGGAACTTCCTGTAG

Related Sequences

XP_004850373.1 Protein

Prdm2 PREDICTED: PR domain zinc finger protein 2 isoform X2 [Heterocephalus glaber]

Length: 1672 aa      View alignments
>XP_004850373.1
MNQNVPEPVAATEILAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARNKRSSPKSRKGKKKSQENKNRGNKPQGIQLRRSEPDSTPANMRDSAEGPKQEERPLAEAPEQPSVPQEVVSQDVVPQLLIPPPACEPQPDPEGKQEAADCEANDLEEEEEEEDDDDDDDDDDELEEEGEEEADMPNESSVKEPEIQCDEKPEDLLEETKSISNETPEDSSEVTPVIKIPATKDEANGEVFETFMFPCQHCERKFSTKQGLERHMHIHMSAVHHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSATVQPSEDLADGKGSVENVGPKNELKPPHLGQYYLISNSEKASQETANPSVVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLNEPQPPAEQAQPTPNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESNSADLYGINCLLTPVTVEITQNIKTTPVPVTDDLSKEPSSSTNCESKKRRTASPPVLPKIKAETDSDPTVPSCSLSLPLSISTTEAVSFPKEKSVYLSSKLKQLLQTQDKLAPPVGISASEIPKLGPVCVSAPASMLAITSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAMWSDTVLTSKKPKLERHSDSPSWSLSGREERETRTPPCFDEYKISKDWVTSSTFSNVCNQQPLDLSSGVKQKAEGAGKTPVQWESVLDLSVHKKHCSDSEGKEFKENHSAQPTCSTVKKKKPTTCMLQKVLLNEYNGINLPVESTLDVTRSPSPCKSLDTHPDSDLGSDSHFSAPTAESPPAVCPSSPALQTPSLSSSQLPPFLIPTDPPSPLACPPVLTVATPPPPLLPTVPLPAPCASASPQHCPSPLSSATAQSPLPILSPTVSPSPSPAPPVEPLLSAASPGPPTLSSSSSSSSSSFSSSSSSPSPPPLSAVSSVVSSGDNLEASLPAITFKQEELENESLKPQEEPQSAVEQDIIQETFSKNFVCNVCESPFLSIKDLTKHLSVHAEEWPFKCEFCVQLFKAKSDLSEHRFLLHGVGNIFVCSICKKEFAFLCNLQQHQRDLHPDEVCTHHEFESGTLRPQNFTDPSKAQMEHMQGLPDDPLETSKEEEELNDSSEELYTTIKIMASGIKTKEPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSPNKLKLSALKKKNQLVQKAILQKNKSAKQKADLKNASESSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPSKRKVSHSAKKGGYMSLASSDKNSSNHRRRTADAEIKMQSSQMPLGKTRARSSGPVQAPLPSSSFRSKQNVKFAASVKSKKPSSSSLRNSSPIRMAKITHVEGKNPKVVAKNHSAQLSSKTSRSLHVRVQKSKAVLQNKSTLASKKRTDRFSVKSRERSGGPITRSLQLAAAADPNESRREDSSAKQELKDIRNFL