Sequence details NCBI ID: XM_004849700.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Exoc1
Gene Name exocyst complex component 1, transcript variant X1
Entrez Gene ID 101724313

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EXOC1 ENSCPOG00000003208 (Guinea pig)

Gene Details

exocyst complex component 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002905, Guinea pig)

Protein Percentage 97.2%
CDS Percentage 94.55%
Ka/Ks Ratio 0.07028 (Ka = 0.0145, Ks = 0.207)

EXOC1 ENSG00000090989 (Human)

Gene Details

exocyst complex component 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000370695, Human)

Protein Percentage 98.99%
CDS Percentage 94.3%
Ka/Ks Ratio 0.01822 (Ka = 0.0046, Ks = 0.2522)

Exoc1 ENSMUSG00000036435 (Mouse)

Gene Details

exocyst complex component 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109121, Mouse)

Protein Percentage 97.43%
CDS Percentage 88.59%
Ka/Ks Ratio 0.01931 (Ka = 0.0119, Ks = 0.6172)

Exoc1 ENSRNOG00000002144 (Rat)

Gene Details

exocyst complex component 1 (Exoc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056561, Rat)

Protein Percentage 91.33%
CDS Percentage 85.71%
Ka/Ks Ratio 0.07534 (Ka = 0.0492, Ks = 0.6535)

Genome Location

Sequence Coding sequence

Length: 2685 bp    Location: 13556226..13496432   Strand: -
Raw sequence   
>XM_004849700.1
ATGACAGCAATCAAGCATGCATTACAAAGAGATATTTTTACACCGAATGATGAACGCCTGCTGAGCATTGTGAATGTCTGCAAAGCGGGAAAAAAGAAAAAGAACTGTTTTTTGTGTGCCACAGTGACAACTGAACGCCCTGTGCAGGTGAAGGTGGTCAAAGTCAAGAAATCTGATAAAGGAGATTTCTACAAAAGACAGATTGCTTGGGCTCTTCGAGACCTTGCTGTTGTAGATGCCAAAGATGCTATCAAAGAAAATCCTGAATTTGACTTACATTTTGAAAAAATATATAAATGGGTTGCTAGTAGCACTGCTGAAAAGAATGCATTTATCTCATGCATTTGGAAATTGAATCAGCGATATCTCCGGAAGAAAATTGATTTTGTCAATGTTAGCTCACAGCTATTGGAAGAATCTGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGCGGTGATGAAGAAGCAGTAGATGAATACCAAGAGTTAAATGCCAGAGAAGAGCAAGATATTGAAATAATGATGGAAGGCTGTGAGTATGCAATCTCTAATGCTGAGGCCTTTGCAGAAAAGCTATCCCGAGAGCTGCAGGTGCTAGACGGGGCCAACATCCAGTCAATCATGGCCTCTGAAAAACAGGTGAACATCCTGATGAAGCTGCTGGATGAGGCCCTAAAGGAGGTGGATCAGATTGAGTTAAAACTGAGCAGTTATGAGGAAATGCTCCAAAGTGTGAAGGAACAGATGGATCAGATCTCTGAAAGCAACCATCTAATCCATCTCAGTAACACTAATAATGTGAAACTCCTGTCAGAGATAGAGTTCCTTGTGAACCACATGGACTTGGCCAAAGGCCATATAAAGGCCCTTCAGGAAGGAGATCTTGCTTCTTCCCGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGCCATGACATGCTTCTGGCAGTCAAGCAGCAGCAGCAGCGTTTTAGTGATTTACGAGAACATTTTGCCAGGAGACTGGCCAGTCACCTCAACAATGTTTTTGTTCAACAGGGTCATGATCAGAGTTCAACTCTAGCTCAACACTCTGTTGAACTGACTTTACCCAATCATCATCCATTTCATAGAGACTTGCTCCGATATGCCAAGTTGATGGAGTGGCTGAAGAGTACAGATTATGGAAAATATGAGGGACTGACAAAGAATTACATGGATTATTTATCTCGACTGTATGAAAGAGAAATCAAAGATTTCTTTGAAGTTGCAAAGATCAAGATGACTGGTACAACTAAAGAAAGCAAGAAGTTTGCTACACTGCCTCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGAGTCTTCATGGAAGTTCAGGAAAATTAACTGGATCTACTTCTAGTCTAAATAAACTCAGTGTTCAGAGCTCAGGGAATCGCCGATCCCAGTCATCTTCTCTGTTGGATATGGGGAACATGTCTGCCTCTGATCTTGATGTTGCCGACAGAACCAAATTTGACAAGATCTTTGAGCAGGTGCTAAGTGAACTGGAGCCCCTATGTCTGGCAGAACAGGACTTCATAAGTAAATTTTTCAAACTGCAGCAACATCAGAGTATCTCTGGAACTATGACTGAAGCAGAGGACTTGGATGGAGGAACATTATCACGGCAACATAATTCTGGCACACCACTACCTGTTTCATCGGAGAGAGATATGATTCGCCAAATGATGATTAAAATATTCCGCTGCATTGAGCCAGAACTGAACAACTTAATTGCATTAGGAGACAAAATTGATAGTTTTAATTCCCTTTACATGCTAGTCAAAATGAGTCATCATGTATGGACTGCACAGAATGTGGACCCTGCTTCTTTTCTTAGTACTACATTGGGAAATGTTTTGGTGACTGTCAAAAGGAACTTTGACAAATGCATTAGTAACCAAATAAGGCAAATGGAAGAAGTAAAGATCTCAAAGAAGAGTAAAGTAGGAATTCTTCCATTTGTTGCTGAATTTGAAGAATTTGCTGGACTTGCAGAATCAATCTTTAAAAATGCTGAGCGTCGTGGAGATCTGGATAAAGCATATACCAAACTTATCAGAGGAGTGTTTGTTAATGTGGAGAAAGTAGCAAATGAAAGCCAGAAGACCCCGAGAGATGTGGTTATGATGGAAAACTTTCACCATATTTTTGCAACTCTTTCTCGTTTGAAAATCTCATGTCTAGAAGCTGAAAAAAAAGAAGCCAAACAAAAGTATACTGATCACCTTCAGTCTTACGTCATTTACTCTTTAGGACAACCTCTTGAAAAGCTAAACCATTTCTTTGAAGGCGTTGAAGCTCGTGTAGCACAGGGTATAAGAGAGGAGGAAGTAAGCTACCAACTTGCATTTAACAAACAAGAACTTCGAAAAGTTATTAAAGAGTATCCCGGAAAGGAAGTGAAAAAAGGTCTAGATAACCTCTATAAAAAGGTTGATAAACATTTATGTGAAGAGGAGAACTTACTCCAGGTGGTGTGGCACTCCATGCAAGATGAATTTATACGCCAGTACAAGCACTTTGAAGGCTTGATAGCTCGATGTTACCCTGGATCTGGTATTACAATGGAATTCACGATTCAGGATATTCTGGATTATTGCTCCAGCATTGCACAGTCCCACTAA

Related Sequences

XP_004849757.1 Protein

Exoc1 PREDICTED: exocyst complex component 1 isoform X1 [Heterocephalus glaber]

Length: 894 aa      View alignments
>XP_004849757.1
MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDKGDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQRYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEAVDEYQELNAREEQDIEIMMEGCEYAISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEEMLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRGIEACTNAADALLQCMNVALRPGHDMLLAVKQQQQRFSDLREHFARRLASHLNNVFVQQGHDQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYEREIKDFFEVAKIKMTGTTKESKKFATLPRKESAVKQETESLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDMGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSISGTMTEAEDLDGGTLSRQHNSGTPLPVSSERDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVKMSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEEVKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGITMEFTIQDILDYCSSIAQSH