Sequence details NCBI ID: XM_004849250.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ciz1
Gene Name CDKN1A interacting zinc finger protein 1, transcript variant X11
Entrez Gene ID 101703022

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CIZ1 ENSCPOG00000006863 (Guinea pig)

Gene Details

CDKN1A interacting zinc finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006187, Guinea pig)

Protein Percentage 78.17%
CDS Percentage 83.38%
Ka/Ks Ratio 0.35065 (Ka = 0.1409, Ks = 0.4019)

CIZ1 ENSG00000148337 (Human)

Gene Details

CDKN1A interacting zinc finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000377232, Human)

Protein Percentage 77.59%
CDS Percentage 82.17%
Ka/Ks Ratio 0.25887 (Ka = 0.1358, Ks = 0.5245)

Ciz1 ENSMUSG00000039205 (Mouse)

Gene Details

CDKN1A interacting zinc finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108960, Mouse)

Protein Percentage 69.18%
CDS Percentage 75.79%
Ka/Ks Ratio 0.30183 (Ka = 0.2162, Ks = 0.7164)

Ciz1 ENSRNOG00000013442 (Rat)

Gene Details

CDKN1A interacting zinc finger protein 1 (Ciz1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062979, Rat)

Protein Percentage 68.32%
CDS Percentage 75.21%
Ka/Ks Ratio 0.29401 (Ka = 0.2251, Ks = 0.7657)

Genome Location

Sequence Coding sequence

Length: 2574 bp    Location: 6654691..6672357   Strand: +
Raw sequence   
>XM_004849250.1
ATGCTGCAGAGAGCTTTGCTTTTGCAGCAGTTGCAAGGACTGGACCAGTTTGCAATGCCACCAGCCACGTATGACAGTGCCGGTCTCACCATGCCCACGGCAACACTGGGCAACCTCCGTGGCTACAGCATGGCAACCCCAAGCCTCACAACCCCTAGTATTACACCGTCCCAGCTGGGTCCTCCCAATCTGCAGCAGTTCTTTCCCCAGGCCACTCGCCAGTCTCTGCTGGGCCCCCCTCCTGTTGGGGTCCCTATGAACCCCTCGCAGCTTAATCTCTCAGGGAGAAACCCCCAGAAACAGACCCGGACCCACTCTTCCAACACCCCCAATCGCAAGGATTCTTCTTCCCAGACAATGCCTGTGGAAGATGGGGCAGACCCCCGAGAGGGGTCTGAAGAAGCTGAAGAGTTCAGAATGGACACACCCGAAGACCAAGATTCGCTCCCCTGCCCAGATGGCATCATGAGTGAGAAACTCACTCCCACACCTGAACCTGAACCTTGTGAGGTGACTGAGCCACTGGCCAAGAGGTTGAGGAGCTCAGAGAGGCCCACAGAGAAGGGGCCTCCAGGGCAGTCACAGGTGAAGGTGCAGCCGCAGGCCCGGATGACAGTGGCCAAGCAGACCCAGACACCAGAACTGCTGCCTGAGCCACCGGAAGCCCGAGTGCTGCCCCGATTCCAGCCACGGGTCCTGCAGATCCAGGCCCAGGTGCAGCCCCAGACTCCACCACAGATGCTACCTGTGGACACCCAGGTGCCGCTGAAGCTGCAGAAGCAGGCACAAACACAGACCTCCCCAGAGCACTTAGTGCCGCTGCAGAAGGAGGCAGAGCCACAGAAGCAGGTGCAGTCACAGGCCTGTGCCCAGCCCCCAAAGCAGGGGCAGCTGCAGCTGCAGAAGCAGGCCCAGACCCAGACGTATCCACAGGTGCCTAGCCAGGGCCAGCTGAGGGAGCAGCCGCAGGAGCAGCCCCCAGAGCAGCCTTCCACGCAGGTGCCTGTACAGCCACCGGAGCAGACCCAGGGCCACCCTGAGACCCAGGTGCAGGGGTCGGTGCCCACCCCAGAGCGAGTGCCGATGTCTGTGCATGCCACCGTGCTGGGGACACCAGCTCATGCCATAGGAGAGGCTGGGGGAGGCATGAAGGAGGCGTCACCGGAACCGGTGGGGGCCCAGGTTGGGGTGGCAGCCAGCCAGGAGTCATCAGCCGGTGGTACGCACGCAGCAGAATGTGAAAAAAGAGCACGAGAGATGCTTGGGGTGTGGGGCGCTGGGGGCTCCCTGAAGGTCACCATCCTGCAGAGCAGCGACAGCCGGGCCTTTAACACTGCACCCCTCACGCCTGGGCCCCGTCCCGGCGACTCTTCCTCTGCCACCCCTGTGGCCACCAGCACACCCTCTAAGCAGGGCCTTCACTTCTTCTGCTATGTCTGCAAGGTGAACTGCAGCAGCCAGCAGGAGTTCCAGGACCACATGTCAGAGGCCCAGCACCTGCAGCGGCTCTCGGAGCTCCAGCACATGAACCAGGCGTGCCTCCTGTCCCTGCTACCCATGCCCCGGGATGCCCTGGAGAGAGAGGAAGAGCCACCTCCCAGGCGCTGGTGCAACACCTGTCAGGTATACTATGTGGGGGATCTGATCCAGCACCGCAGGACACAGGACCACAAGGTCGCCAAACAGTCCCTGAGACCCTTCTGCACTATTTGCAACCGCTACTTCAAGACCCCCCGCAAGTTTGTGGAACATGTGAAGTCCCAGGGGCACAAGGACAAAGCCAAGGAGACACTCGAGAAGGAGACGGCTGGCCAGGATGAGGACCACTTCATCACAGTGGATGCCGTGGGCTGCTTTGAGGGCGATGAAGAAGAGGAGGAGGAGGACGATGATGAAGAGGAAGAGGTTGAGGTTGAGGAAGAACTCTGCAAGCAGGTGGCTGGGTTGAAGTGCAAAGATGGCTCAGGAGAGGAGCGGAAGGGCTTGGAGACCTACAGCTCCAGCACTGTGTATGGTAAGACCCAAGCTCCGAGCCCACCAGTGGGGACAGTGGTCCCACCTCCAGGTGACCCCCCAGGTCCCAGCCGCTGCATTCCAGCCAGCCAACCTGTCCTCTTCTGCCCCCACCTAGACGGTGGGTGTGGGGTAAGTGGGCCCCAGAGGGGGCAGGACACCTGGCTGGTCCTGAGGACTTGTGTACATGACCCTGCCCTTGTAGGTGTGGACTTCCTGGTACCCGTGATGGGCTACATCTGTCACGTCTGCCGCAAATTCTGCCATGGCAGCTCCAGGGCGCGGCTCTCCCACTGCAAGTCGTTGGCCCACTTTGAGAACATGCAGAAACACAAAGCAGCTGAGAGCTCCGGCCCCACGTCCCGGCCCGTGAGCCGCCAGTGCGCCATCAATGCCCGCAATGCGCTGACTGCACTGTTCACCTCCAGTGTTGGCGGTGGCCGCTCGCCCAGCCAGTCCAGCCCCCAGGACAAGGCCAAAACCCCCAGCAAGGTGACGCCTGGATCCCAATCCCCTAATCCCCCTCCCCGGCCTCGGCGCTCGAGCCGCCTCAAAACCTGA

Related Sequences

XP_004849307.1 Protein

Ciz1 PREDICTED: cip1-interacting zinc finger protein isoform X11 [Heterocephalus glaber]

Length: 857 aa      View alignments
>XP_004849307.1
MLQRALLLQQLQGLDQFAMPPATYDSAGLTMPTATLGNLRGYSMATPSLTTPSITPSQLGPPNLQQFFPQATRQSLLGPPPVGVPMNPSQLNLSGRNPQKQTRTHSSNTPNRKDSSSQTMPVEDGADPREGSEEAEEFRMDTPEDQDSLPCPDGIMSEKLTPTPEPEPCEVTEPLAKRLRSSERPTEKGPPGQSQVKVQPQARMTVAKQTQTPELLPEPPEARVLPRFQPRVLQIQAQVQPQTPPQMLPVDTQVPLKLQKQAQTQTSPEHLVPLQKEAEPQKQVQSQACAQPPKQGQLQLQKQAQTQTYPQVPSQGQLREQPQEQPPEQPSTQVPVQPPEQTQGHPETQVQGSVPTPERVPMSVHATVLGTPAHAIGEAGGGMKEASPEPVGAQVGVAASQESSAGGTHAAECEKRAREMLGVWGAGGSLKVTILQSSDSRAFNTAPLTPGPRPGDSSSATPVATSTPSKQGLHFFCYVCKVNCSSQQEFQDHMSEAQHLQRLSELQHMNQACLLSLLPMPRDALEREEEPPPRRWCNTCQVYYVGDLIQHRRTQDHKVAKQSLRPFCTICNRYFKTPRKFVEHVKSQGHKDKAKETLEKETAGQDEDHFITVDAVGCFEGDEEEEEEDDDEEEEVEVEEELCKQVAGLKCKDGSGEERKGLETYSSSTVYGKTQAPSPPVGTVVPPPGDPPGPSRCIPASQPVLFCPHLDGGCGVSGPQRGQDTWLVLRTCVHDPALVGVDFLVPVMGYICHVCRKFCHGSSRARLSHCKSLAHFENMQKHKAAESSGPTSRPVSRQCAINARNALTALFTSSVGGGRSPSQSSPQDKAKTPSKVTPGSQSPNPPPRPRRSSRLKT