Sequence details NCBI ID: XM_004847017.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tnf
Gene Name tumor necrosis factor
Entrez Gene ID 101718432

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNF ENSCPOG00000002343 (Guinea pig)

Gene Details

Cavia porcellus tumor necrosis factor (Tnf), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002129, Guinea pig)

Protein Percentage 84.78%
CDS Percentage 86.96%
Ka/Ks Ratio 0.2199 (Ka = 0.0927, Ks = 0.4214)

TNF ENSG00000232810 (Human)

Gene Details

tumor necrosis factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000398698, Human)

Protein Percentage 77.83%
CDS Percentage 84.49%
Ka/Ks Ratio 0.27655 (Ka = 0.1263, Ks = 0.4567)

Tnf ENSMUSG00000024401 (Mouse)

Gene Details

tumor necrosis factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025263, Mouse)

Protein Percentage 80.43%
CDS Percentage 80.87%
Ka/Ks Ratio 0.14796 (Ka = 0.1252, Ks = 0.8461)

Tnf ENSRNOG00000000837 (Rat)

Gene Details

tumor necrosis factor (Tnf), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001110, Rat)

Protein Percentage 77.83%
CDS Percentage 80.43%
Ka/Ks Ratio 0.16625 (Ka = 0.1377, Ks = 0.8281)

Genome Location

Sequence Coding sequence

Length: 693 bp    Location: 24625531..24623420   Strand: -
Raw sequence   
>XM_004847017.1
ATGAGCACAGAAAGCATGATCCGGGACGTGGAGCTCGCTGGGGAGGAGCCCCTCCAGAAGGCAGGGGGCCCCCAGGGCTCCGGGCGGTGCTGGTGCCTCAGCTTCTTCTCCTTCCTGCTCGTGGCAGGAGCCACCACGCTCTTCTGCCTGCTGCACTTCGGGGTGATCGGCCCCCAGCGGGGAGAGTTTAAGGATCTCAACTTTTTCTCTCCTCTGTTCTCCACAGGATCAGCTTCTCAAAGCGGGAATGACAAGCCTGTTGCTCATGTTGTAGCAAACCAACAAGGACAGGAGAAGCTGGAGTGGCTGAGCAAGCGTGCCAATGCCCTCTTGGCCAATGGCATGGATCTAACGGACAACCAGCTGGTGGTGCCTTCGGACGGGCTGTACCTCGTCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCTACGTCCTCCTCACCCATACTGTCAGCCGCCTAGCCATCTCCTACCAGGACAAGGTCAACCTCCTGTCTGCCATCAAGAGTCCCTGCCAGAAGGAGACCCCAGAGGGGGCTGAGCTCAAGCCCTGGTATGAGCCCGTCTACCTGGGAGGGGTCTTCCAGCTGCAGAAGGGAGACCGCCTCAGTGCCGAGGTCAATCTGCCCGACTATCTTGACTTCGCGGAGTCCGGGCAGATCTACTTCGGGGCCATTGCCCTGTGA

Related Sequences

XP_004847074.1 Protein

Tnf PREDICTED: tumor necrosis factor [Heterocephalus glaber]

Length: 230 aa      View alignments
>XP_004847074.1
MSTESMIRDVELAGEEPLQKAGGPQGSGRCWCLSFFSFLLVAGATTLFCLLHFGVIGPQRGEFKDLNFFSPLFSTGSASQSGNDKPVAHVVANQQGQEKLEWLSKRANALLANGMDLTDNQLVVPSDGLYLVYSQVLFKGQGCPSYVLLTHTVSRLAISYQDKVNLLSAIKSPCQKETPEGAELKPWYEPVYLGGVFQLQKGDRLSAEVNLPDYLDFAESGQIYFGAIAL