Sequence details NCBI ID: XM_004846073.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nhsl1
Gene Name NHS-like 1, transcript variant X5
Entrez Gene ID 101704187

Database interlinks

Part of NW_004624753.1 (Scaffold)

For more information consult the page for NW_004624753.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NHSL1 ENSCPOG00000006535 (Guinea pig)

Gene Details

NHS-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005885, Guinea pig)

Protein Percentage 84.73%
CDS Percentage 87.95%
Ka/Ks Ratio 0.26526 (Ka = 0.0815, Ks = 0.3073)

NHSL1 ENSG00000135540 (Human)

Gene Details

NHS-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000394546, Human)

Protein Percentage 76.58%
CDS Percentage 81.2%
Ka/Ks Ratio 0.28244 (Ka = 0.1424, Ks = 0.5043)

Nhsl1 ENSMUSG00000039835 (Mouse)

Gene Details

NHS-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040799, Mouse)

Protein Percentage 72.76%
CDS Percentage 77.26%
Ka/Ks Ratio 0.25292 (Ka = 0.1753, Ks = 0.693)

Nhsl1 ENSRNOG00000011386 (Rat)

Gene Details

Protein Nhsl1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015115, Rat)

Protein Percentage 72.43%
CDS Percentage 77.01%
Ka/Ks Ratio 0.2557 (Ka = 0.1792, Ks = 0.7008)

Genome Location

Sequence Coding sequence

Length: 4695 bp    Location: 15413163..15481763   Strand: +
Raw sequence   
>XM_004846073.1
ATGGTGGTGTTCATAAATGCAAAGATTAAGTCTTTCATTAAACTTTTTAAGAAGAAAACGGTTTCCAACCTAGATGAGGAGAGCCGATGGACAGTCCACTACACGGCCCCATGGCACCAGCAGGAGAACGTGTTCCTGCCCAGCACAAGACCCCCATGTGTGGAGGACCTGCACCGCCAGGCCAAGCTCAACCTCAAGTCGGTGTTGAGGGAGTGTGACAAGCTGAGGCGGGATGGCTACCGGAGCTCTCAGTACTACTCTCAGGGACCCACCTTTGCAGCTTACCCCGGCCCACTCTGCGATGATTATCACCATGAGGACGCAGACTCTGATCAGAAGTGTTCTGTTTCTTCATCAGAGGAGGAAAGACTTACTGGCATCAGGAGACCGAAAACGCCAACCTCAGCTGACTTCTCTGACCTTAATACTCAGACAAACTGGACCAAGTCACTGCCGCTGCCAACACCGGAAGAGAAGATGCGACAGCAAGCCCAGACGGTGCAGGCTGACGTGGTGCCCATCAACATAACTGGGGAGAATTTCGATCGCCAGGCCAGCCTTCGGCGGTCTCTAATTTACACAGACACTCTGGTAAGACGACCGAAGAAAGTCAAAAGGAGAAAGACTATTACAGGAGTCCCTGACAACATACAGAAGGAGCTAGCATCAGGCACTGGCCAAGATGAGGCCGGTGGTCCCTCAGGGTACCCCCCAGACCACTGTTCCATGCGAGGAAGGCTTGATAGCTATCACTGTGCTGGGCAGCGCTCAGAAACCAGGGACTCCGGCTGCCAGACCGAGGATGTGAAAGTTGTGCCACCCTCGATGAGAAGAATCAGGGCCCACAAGGGGCTGGGCATTGCCGCCCAGATGAGCCCCTTCTCAGGCTCCTCCGGCAACATGTCTGTGCTGAGCGATCCGGCGGGTGTCACATTCCCCTCTCGCCTCAACAGTGACGCTGGCTTCCACAGTCTTCCACGTTCTGGGGCCAGGGCCAGTGCTCACTCCCTGGGTGCCCTGGGCCCTGCAGATGATGTGGACAGCTCCTTCCCCTACCAGAGGGCTAACTCACATGGAGACAACAACTTAGGACATTTCGGAGGTGCCCCGAGGTCAGGAACATTTTTGAGGCCCAAATCCCAGGAGCTGAGGCACTTTGAGAGTGAGACCGTAACAAGCCCAGCGTGTATGGTCTCCCCTCATGCGACCTACTCCACCAGCATCATCCCCAATGCCACCCTCTCGTCGTCTTCGGACATTATCATTCTTCACACTGCTCAGAGTGTGGGGCCGCTCGACAGCAGAATGACCAGCTCCTCGTACTCAAGGATCAAACCCAGACACGGTGTGCAAGTTGGTCACCAGTCCCCCAGCCATCACTGGAGTGACGGCCACTCCTCCATTCATTCACAGCCCTTCGACTCCCATTCCCCCAGTATCACCACACTGCTGTCCGTCTGTGGCTCAGAGGTCTCTCCCAATGGGTCCCAAGCCATGCCTTGTAATTGCAGAAACACCCTGAGTTTCCCAGCCCACTCCCAGGATGTGGACGGCAAGAGTGAGTCCAGCTCTTCCGGGGACAGAGGGCAGGGCAGTGTGGAGCCGTGGGAGCACAGGGCCTCTGGCAGTGGGCGGGTGTCACCCCTGAAGCCCCATCTGGCTGCCCCTGGCTGCTCTACTCCCACAAGTAACCAGAGCAGCTGCAGTTTGGACCAGACATCCACCAGAGAGGATGCAGGCTCCCTGTGCTCCGAGGACCACGCTGCCTACTACAGGTCGGTGCACAGTGACTCGGGATGTGGGCCTGGGAATCTGTGCAATAGCAGTGGTGGCTTTGAGAACCCCAGGGACAATGTGGTCAATGTTTTCGATGGAAGAGCTCAGAAAAGCCAAGGGGACCAGTCAGGGTACCCTGATAAATCCCTTCCAAGAAACATCTCTTTGAAGAAAGCCAAGAAGCCTCCCCTGCCGCCGTCCCGGACAGACTCTCTCCGCAGGATTCCCAAGAAGAGTGGCCAGTCGAACGGGCAGGTGCTTAATGAGAGCCTGATCGCCACACTCCAGCAGTCGCTGCAGCTGAGCCTCCCGGGCAAGGGTGGCAGCTCGGCCTCGCAGAGTCCCTGCAGTGACTTCGAGGAGCCCTGGCTGCCCCGCTCCCGGAGCCAGAGCACGGTCAGCGCTGGCAGCAGCATGACCTCCGCCACCACCCCCAATGTGTACTCCCTGTGCGGGGTCACGCCGTCGCAGAGCGACACGAGCAGCCTCAAGTCGGAGTACACGGACCCTTGGGGCTACTACATTGACTACACAGCTGTGCAGGAAGAGCCCGGGGACCCAGCGGGGTGTGGCTCAGCCAGCAGTGGAGCCCCTACTGGGAATGGCCCAGTCCACCACATCCAAGCGGAGTCCAAGGCCATGATGCCCCAAGTGCCGGGCAAACCAAAGGTCATATCGCCAGAGAAGTCCCAGAGAGTCACTTCTCCATCCAGTGGGTATTCCAGCCAGTCGAATACACCCACAGCACTCACCCCCGTGCCTGTGTTTTTAAAATCAATGTCACCAGCCAATGGGAAGGGGAAGGCCAAGCCCAAGGTACCAGAAAGGAAGTCTTCCCTGATCTCTTCAGTATCCATGTCCTCCTCGTCCACGTCTCTGTCCTCTAATACGTCCACCGAAGGTGGCGGCACAGTGAAGAAGCTGGATGCTGCCCCAGCTCTGCCCTTTGCTCCTCCTCCCCTTTCTCCTGTCCCAGCCCCATGTCCTGCAGATAAGCCCTCCCTTCTTCCCCCACCTCCTGTAGCAGATAGCCCCGAGTGCTCCCCTCTGCCTCACTCACCTGTGTTTCCCCCTCCACCCCCAGAAGTGCTCACCCTCTTCTGCTCCCCCACTGATGGGTGCTGTCCCCCTCCCCCCCCTGCACTGAGCCCCTTTATGCCAGATGCACTGGCTTCCTCACCAGCGCCCCCACCTTTCCCACCCTTCTTGGAGCCCCCACCTGCCCCCCCTCTGGACCCCAAATTTATGAAACACACCAGGCCTCCTTTGAGAAAGTCTGGGCAGCCTGAATCCTCCTGGGAGGCCCTCAGGCCATCTCCGAACAAGGAGGAGAGTGGCAGGCCTCCCATGCCCCTCATCACCACGGAAGCACTGCAGATGGTACAGTTGAGGCCCGTGAGAAAGGGCTCAGGCGCCGAAGTGGCACTGTCGCCTGAACCAACAGCTCAGGAACAACGAACTCCGACTGCTCTGCAATATCACTTAAAGCCATCTGCTCTCCTGAAATCCCGAAATAGCATAAATGAAATGGAGAGTGAAAGCCAGCCTGCCTCTGCAACTAGCTCGCTTCCGACGCCTGCCAAGAGCCAGAGTCAGGGTGACCGTGACAGTGCAGCCGAGCATGGCGGTCCTGCGAGCTGCAGCTATGGAGCGCCACGTCCTGGGCCAGGCTCCAGGGAAGCAGAGTCTGGGCCTGGCCTCAGGACCACCCCACTCCCAGACTCTTCACCCATCAGGAAGCCGCCCCCCATCTCCAGAAAGCCCAGACTGTTCCTGGTGGTGCCACCTCCACAGAGAGATTTGGAAGCGGAGCCCTCGGAGAATGGGAGTGAAGCCCTCCGAGCTGTGCCCAGCTCCACCAGGGCAGAGGAGGGCTCCGCGCACAGCAACGAGGCGAAAGGGGGTTTTGCAGCCCAAGCCAGTCCTCACGCCACGGACCCCAGCAGCTTGGTTTTGGAGGGAGGAGCTGCAGGGTTCGTGGAAACCAATGCCCCCATGGTACAGCCTGATGCCTCACCAGCCCCCACGCAGGCAGAGCCAGCCGGGGACGGCGCAGATGGTGGGGGCAGTGCAGAGAGCTGCCCTTCTCAACAGGATGGAGAAGCTGGGGTGCAGGAGACGCACTCAGCCGATCCCTCCTCGGAAGCTTGTGACGCCTTCAACAAAGATGACGTCGAGGAGGTGACGACCCCCACGAGACCCAGGACCACCGAAGACCTTTTTGCAGCTATTCACAGATCCAAAAGGAAAGTTCTTGGCCGGAAAGACTCGGAGGACGACCACTCGCGAAACCACTCTCCCTCGCCGCCGGTAACCCCCACGGGCGCCGCCCCCAGCCTGGCCTCCCCCAAGCAGGTGGGGTCGATCCAGAGGAGCGTGCGCAAGAGCAGCACCAGCAGCGACAACTTCAAAGCCCTGCTGCTCAAGAAGGGCAGCCGCTCAGACGCCAGCGCCCGCATGTCGGCGGCCGAGATGCTCAGGCACACGGACCCGCGGTTCCAGAGGTCCAGGTCGGAGCCCGCGCCCGACACCCCCGAGAGCCCGTCCAGCTGCTCGCCCAGCAAGAGCCGCCGGGCGCAAGAGGAGTGGGCGCGGAGCGAGGGCCCCATGCCGCGCAGCCTGTCCTTCTCGGGGCCCCGCTACGGCCGCAGCCGGACGCCGCCCTCCGCCGCCAGCAGCCGCTATAGCGTGCGGAACCGCATCCAGAGCAGCCCGATGACCGTCATCTCTGAGGGCGAGGGCGAGGCAGGGGAGCCTGCGGACCCCAGGGCGCGCCGCGCCAAGCCGTGCGCTCGGGACCAGGGCGAGCAGGGTTGCGAGGAGCCGGACGCCCCCTTGCGGCCTCGGACTCCCGGGCGGGCAGATGAGGGCGGGGACCCCTCGGAGCCCCTTGGGGGTGCTGGCTTGGAGGAGAGCTAG

Related Sequences

XP_004846130.1 Protein

Nhsl1 PREDICTED: NHS-like protein 1 isoform X5 [Heterocephalus glaber]

Length: 1564 aa      View alignments
>XP_004846130.1
MVVFINAKIKSFIKLFKKKTVSNLDEESRWTVHYTAPWHQQENVFLPSTRPPCVEDLHRQAKLNLKSVLRECDKLRRDGYRSSQYYSQGPTFAAYPGPLCDDYHHEDADSDQKCSVSSSEEERLTGIRRPKTPTSADFSDLNTQTNWTKSLPLPTPEEKMRQQAQTVQADVVPINITGENFDRQASLRRSLIYTDTLVRRPKKVKRRKTITGVPDNIQKELASGTGQDEAGGPSGYPPDHCSMRGRLDSYHCAGQRSETRDSGCQTEDVKVVPPSMRRIRAHKGLGIAAQMSPFSGSSGNMSVLSDPAGVTFPSRLNSDAGFHSLPRSGARASAHSLGALGPADDVDSSFPYQRANSHGDNNLGHFGGAPRSGTFLRPKSQELRHFESETVTSPACMVSPHATYSTSIIPNATLSSSSDIIILHTAQSVGPLDSRMTSSSYSRIKPRHGVQVGHQSPSHHWSDGHSSIHSQPFDSHSPSITTLLSVCGSEVSPNGSQAMPCNCRNTLSFPAHSQDVDGKSESSSSGDRGQGSVEPWEHRASGSGRVSPLKPHLAAPGCSTPTSNQSSCSLDQTSTREDAGSLCSEDHAAYYRSVHSDSGCGPGNLCNSSGGFENPRDNVVNVFDGRAQKSQGDQSGYPDKSLPRNISLKKAKKPPLPPSRTDSLRRIPKKSGQSNGQVLNESLIATLQQSLQLSLPGKGGSSASQSPCSDFEEPWLPRSRSQSTVSAGSSMTSATTPNVYSLCGVTPSQSDTSSLKSEYTDPWGYYIDYTAVQEEPGDPAGCGSASSGAPTGNGPVHHIQAESKAMMPQVPGKPKVISPEKSQRVTSPSSGYSSQSNTPTALTPVPVFLKSMSPANGKGKAKPKVPERKSSLISSVSMSSSSTSLSSNTSTEGGGTVKKLDAAPALPFAPPPLSPVPAPCPADKPSLLPPPPVADSPECSPLPHSPVFPPPPPEVLTLFCSPTDGCCPPPPPALSPFMPDALASSPAPPPFPPFLEPPPAPPLDPKFMKHTRPPLRKSGQPESSWEALRPSPNKEESGRPPMPLITTEALQMVQLRPVRKGSGAEVALSPEPTAQEQRTPTALQYHLKPSALLKSRNSINEMESESQPASATSSLPTPAKSQSQGDRDSAAEHGGPASCSYGAPRPGPGSREAESGPGLRTTPLPDSSPIRKPPPISRKPRLFLVVPPPQRDLEAEPSENGSEALRAVPSSTRAEEGSAHSNEAKGGFAAQASPHATDPSSLVLEGGAAGFVETNAPMVQPDASPAPTQAEPAGDGADGGGSAESCPSQQDGEAGVQETHSADPSSEACDAFNKDDVEEVTTPTRPRTTEDLFAAIHRSKRKVLGRKDSEDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQRSVRKSSTSSDNFKALLLKKGSRSDASARMSAAEMLRHTDPRFQRSRSEPAPDTPESPSSCSPSKSRRAQEEWARSEGPMPRSLSFSGPRYGRSRTPPSAASSRYSVRNRIQSSPMTVISEGEGEAGEPADPRARRAKPCARDQGEQGCEEPDAPLRPRTPGRADEGGDPSEPLGGAGLEES