Sequence detailsNCBI ID: XM_004845391.1 (Coding sequence)  Best Hit

Details from NCBI annotation

Gene Symbol Ppara
Gene Name peroxisome proliferator-activated receptor alpha, transcript variant X2
Entrez Gene ID 101725514

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624752.1 (SequenceType object (1))

For more information consult the page for NW_004624752.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPARAENSCPOG00000001483 (Guinea pig)

Gene Details

Cavia porcellus peroxisome proliferator activated receptor alpha (Ppara), mRNA.

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000001339, Guinea pig)

Protein Percentage 88.65%
CDS Percentage 86.94%
Ka/Ks Ratio 0.05515 (Ka = 0.0533, Ks = 0.9662)

PPARAENSG00000186951 (Human)

Gene Details

peroxisome proliferator-activated receptor alpha

External Links

Gene Match(Ensembl Protein ID:ENSP00000379322, Human)

Protein Percentage 90.15%
CDS Percentage 84.08%
Ka/Ks Ratio 0.0473 (Ka = 0.0466, Ks = 0.9844)

PparaENSMUSG00000022383 (Mouse)

Gene Details

peroxisome proliferator activated receptor alpha

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000105049, Mouse)

Protein Percentage 91.01%
CDS Percentage 84.3%
Ka/Ks Ratio 0.03965 (Ka = 0.0434, Ks = 1.0946)

PparaENSRNOG00000021463 (Rat)

Gene Details

peroxisome proliferator activated receptor alpha (Ppara), mRNA

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000038651, Rat)

Protein Percentage 91.86%
CDS Percentage 84.65%
Ka/Ks Ratio 0.03837 (Ka = 0.0403, Ks = 1.0497)

Genome Location

Sequence SequenceType object (2)

Length: 1404 bp    Location: 3702508..3650922   Strand: -
Raw sequence   
>XM_004845391.1
ATGGTGGACATGGAAAGCCCCAGGTATCCCCTGTCCCCCTTGGAGGCCGAGGACCTGGAGAGCCCACTGTCCAAGGACTTCCTACAAGAAATGGGAACTATCCAGGACATCTCCCAGTCCCTCGGCGAGGACAGCTCCGGGAGCTTTGGTTTCACAGAATACCAGTATTTAGGGAGCGGCCCTGGCTCAGAGGGATCTGTCATCACGGACACCCTGTCACCAGCCTCGAGTCCCTGTTCTGTCAGTTACCCCACAGTCCCTGGCAGTGCAGAGGAGCCTTCGGGTGGCACCCTGAACATCGAGTGCAGGATCTGTGGGGACAAGGCCTCGGGATACCATTATGGGGTCCACGCGTGTGAAGGCTGCAAGGGCTTCTTCCGGCGGACCATCCGGCTGAAGCTGGCGTACGACACATGTGACCGCAGCTGCAAGATTCAGAAAAAGAATCGGAACAAGTGCCAGTACTGCCGTTTCCACAAGTGCCTCTCTGTGGGGATGTCGCACAATGCAATTCGTTTCGGACGGATGCCAAGATCTGAGAAAGCAAAACTGAAAGCAGAAATCCTCACCTGTGAGCATGACACCGAAGACTCCGAGACCGCCGACCTCAAGTCCCTGGCCAAGAGGATCTACGAGGCCTACCTGAAGAACTTCAACATGAACAAGGTCAAAGCCCGCGTCATCCTCGCAGGAAAGACCAGCCACAATCCACCTTTTGTCATCCACGACATGGAGACATTGTGCATGGCCGAGAAGACGCTGGTGGCCCAGATGGTGGCCAATGGCGTCGAGAACAAGGAGGCCGAGGTCCGCTTCTTCCACTGCTGCCAGTGCATGTCGGTGGAGACAGTCACCGAGCTCACGGAGTTTGCCAAGGCCATCCCAGGCTTCGCCAACCTGGACTTGAACGACCAGGTCACCCTGCTGAAGTATGGCGTGTACGAGGCCATCTTCACGATGCTGTCCTCGCTGATGAACAAAGACGGGATGCTAGTAGCGTATGGAAATGGCTTTATCACCCGCGAGTTCCTCAGAAACCTCCGGAAACCGTTCTGTGACATCATGGAACCTAAGTTTGATTTCGCCATGAAGTTCAACGCTCTGGAACTGGATGACAGTGACATTTCCCTTTTCGTGGCTGCTATCATTTGCTGCGGAGATCGGCCTGGCCTTCTAAACATAGACTACATTGAGAAAATGCAGGAGGGCATTGTGCACGTGCTCAAACTCCACTTGCAAAGCAACCATCCAGACGACACCTTCCTCTTCCCCAAACTCCTCCAGAAGCTGGCAGACTTGCGGCAGCTGGTGACAGAGCATGCAAAGCTCGTGCAGGTCATCAAGACCGAGTCAGATGCCTCACTGCACCCGCTGCTGCAGGAGATCTACAAGGACATGTACTGA

Related Sequences

XP_004845448.1 SequenceType object (4)

Ppara PREDICTED: peroxisome proliferator-activated receptor alpha isoform X2 [Heterocephalus glaber]

Length: 467 aa      View alignments
>XP_004845448.1
MVDMESPRYPLSPLEAEDLESPLSKDFLQEMGTIQDISQSLGEDSSGSFGFTEYQYLGSGPGSEGSVITDTLSPASSPCSVSYPTVPGSAEEPSGGTLNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLAYDTCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKAEILTCEHDTEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILAGKTSHNPPFVIHDMETLCMAEKTLVAQMVANGVENKEAEVRFFHCCQCMSVETVTELTEFAKAIPGFANLDLNDQVTLLKYGVYEAIFTMLSSLMNKDGMLVAYGNGFITREFLRNLRKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNIDYIEKMQEGIVHVLKLHLQSNHPDDTFLFPKLLQKLADLRQLVTEHAKLVQVIKTESDASLHPLLQEIYKDMY