Details from NCBI annotation

Gene Symbol Ptprb
Gene Name protein tyrosine phosphatase, receptor type, B, transcript variant X2
Entrez Gene ID 101721226

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPRB ENSCPOG00000005700 (Guinea pig)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005139, Guinea pig)

Protein Percentage 92.15%
CDS Percentage 92.09%
Ka/Ks Ratio 0.19799 (Ka = 0.0421, Ks = 0.2127)

PTPRB ENSG00000127329 (Human)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene Match (Ensembl Protein ID: ENSP00000334928, Human)

Protein Percentage 88.78%
CDS Percentage 88.5%
Ka/Ks Ratio 0.18381 (Ka = 0.0619, Ks = 0.3369)

Ptprb ENSMUSG00000020154 (Mouse)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089805, Mouse)

Protein Percentage 85.79%
CDS Percentage 84.43%
Ka/Ks Ratio 0.14038 (Ka = 0.0789, Ks = 0.5622)

Ptprb ENSRNOG00000004840 (Rat)

Gene Details

Protein Ptprb

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006501, Rat)

Protein Percentage 84.23%
CDS Percentage 83.75%
Ka/Ks Ratio 0.14885 (Ka = 0.0863, Ks = 0.58)

Genome Location

Sequence Coding sequence

Length: 5997 bp    Location: 27219287..27316160   Strand: +
>XM_004845047.1
ATGCTGAGCCATGGAACCGGACTGGCTTTGTGGATCACACTGAGCCTACTGCAGACTGGGCTGGTGGCGTCAGCGAGATGTAACTTCACCCTGACAGAGTCCAGGGTCTCCAGCTTGTGGGTGTCTGTCCAGTGGAGAACTTTAGGGTCACCCTGTAATTTTAGCGTCATCTACAGCAGTGACACCTCAAGGTCCGTGTGGTGCCGAGTCACTCGGATAGACAACACCACCTATGGATGTAATCCCAAAGATCTACAAGCTGGAACCACCTACAACTTCAGGATTGTTTCTCTGGATGGAGAAGAGAGGAGTGTGGTCTTGCAAACAGATCCTTTACCTCCTGCTAGATTTGAGGTCAATAAAGAGAAGATTACTTCAACCAGCTTGCAGGTTTGGTGGACTCATTCTCCTGGAAAAGTCACGTGGTATGAGGTGCAGTTATTTGATGATAATAACAAAAAGATACAAGGAGTCCAAATTCAAGAAAGTACTTCATGGAATGAATACACTTTTTTTAACCTCACTGCTGGTAATAATTATAATATTGCCATCACAGCTGTTTCTGGAGATAAACATTCCTCTACAATTTATACCAATGCATCAACAGCACCTTCTCCAGTCAAAGATATTGACATTTCCACAAAAACTAATTCTCTTCTGGTTTCCTGGTCCCATGGCTCTGGGAATGTGGAACGATACAGGCTGATGTTAACAGATAGAGATGCCCTAGTTCATGACAGTATTGTGGACAAACAGGATACTTCTTATACTTTCCGTGGGCTGATACCTGGCCATCTCTACAACCTCACTGTTGTGACCATGGCTGCAGGACTGCAAAACCACAAATGGAAACTAGTCAGAACAGTCCCCATGGAAGTCTCAAATCTGAAAGTGACAAATGATGGCAGTTTGACCTCTCTAAAAGTCAAGTGGCAAAGACCTCCTGGAAATATAGATGCCTACAACATTACCCTATCTCACCAAGGAACCATCAAAGAATCCAGAATATTAGCACCTCAGGTTATTGAAACTCACTTTAAAGATTTAGCCCCTGGACGACTTTATCAAGTTATCATCAGCTGTATCTCTGGTGAGCTATCAGCTCAGAAGATGGCAGTAGGCAGAACAGTTCCAGACAAAGTTGGGAACCTTGAGGCAAAAAACAATGATCGGATGAGTTCCCTCTTAGTGAGCTGGTCTCCCCCTGCTGGAGACTGGGAGCAGTATCGCATCGTGCTCCTCAATGATTCTTCAGTATTGCTCAACACCACCGTGGGAAAGGAGAAAACACATTACGTGATAGATCATGAGGGTCTCATACCAGGAAGACAGTATGAGGTAGAAGTCACTGTTGAGAGTGGAAATCTAAAGAATTCTGAGCACTGCCAAGGCAGAACAGTTCCCCTGGCTGTCCTCCAGCTTCGGGTCAAACATGCCAATGAAAGCTCACTGGGCATCATGTGGCAGACACCTGTAGCAGAGTGGGAGAAGTACATCATTTCCCTGGCTGACAGAGACCTCTTACTCATCCACAAGTCCCTCTCCAAAGACACCAAAGAATTCACTTTCACTGATCTGGTGCCTGGACGAAAATACACAGCTACAGTCACCAGCATCAGTGGAGACTTGAAAAATTCCTCTTCAATAAAAGGAAGAACAGTGCCTGCCCAAGTGACTGACTTGCAGGTGGCCAACCAAGGGATGACAAGTAGTCTCTTTGCTAACTGGACAGGGGCCCTGGGAGACACAGAATTCTACCAAGTCTTACTGATCCATGAAAACGTGGTCATCAAAAATGAAAGTGTCTCCAGTGAGACTAATAGATACAGCTTCCATTCTCTGAAATCAGGCAGCCTCTACTCTGTGGTGGTAACAACAGTGAGTGGAGGGATCTCTTCCCGACAAGTGGTGGTGGAAGGAAGAACAGTCCCTTGCAGTGTGAGTGGAGTGACGGTGAACAATTTAGGGCGAAATGACTACCTCAGCGTTTCGTGGCTGCCAGCACCTGGTGATGTAGATAACTACGTGGTGATGCTCTCTCACTATGGCAAGGTGGTTCAGTCCCTCGTCATTGCCAAGTCTGTCAGTGAATGTTCCTTCAGTTCCCTCACCCCAGGCCGCCTCTACAACGTGACCATAACTACCAGGAGTGGCAAGTATGAGAATCATTCTTTTGGCCAAGAGCGGACAGTGCCTGACAAGGTCCAGGGAGTCAGTGTTAGCAACTCTGCCAGGAGTGACTATTTGAGGGTGTCCTGGGTACACGCCACAGGGGACTTTGATCACTATGAAGTCACCATTAAAAACAAAAACAACTTCATTCAAACCAAAAGCATTCCTAAGTCAGAAAACGAGTGTGTATTTGTTCAGCTAGTTCCCGGACGGCTGTACAGCATCACTGTTAGTACAAAAAGTGGACAATATGAAGCCAGCGAACAAGGGAATGGGAGAACAATGCCAGAGCCTGTGAGGAATCTAACACTGAGGAACAGGACCACTGAGGACCTGCATGTGACTTGGTCACGAGCTGATGGGGATGTTGACCAGTATGAGATCCAGCTGCTCTTCAATGACATGAAAGTATTTCCTTCTTTTCACCTTGTAAATACCGCAACTGAGTTTTGGTTCACCTCCCTAACACCAGGGCGCCAGTACAAAATTCTTGTCTTGACCATCAGTGGAGATGTACAGCAGTCAGCCTTTATTGAAGGCTTAACGGTGCCTAGTGCTGTCAAAAATGTTCACATTTCTCCCAATGGAGCAACAGATAGCCTGACAGTGACCTGGACCCCTGGCAGTGGAGATGTTGACTCCTATGTGGTGTCTGCATTCAGGCAGAATCAGAAGGTGGAGTCTCAGACCATCCCCAAGCATGTTTCTGAGCACACATTCCACAGACTGGAGGCTGGGGAACAGTACCAGATAGCAATTGCCTCGGTCAGTGGGTCCCTCAGGAACCAGAAAGATGCATTCGGGCGGACAGTTCCAGCATCTGTACAGAGAATAAATGCAGATAATGCATATAGCAGTCATTCCTTAATAGTAAGTTGGCAAAAAGCCATTGGTGTGGCAGAAAGATATGATATCCTACTTCTAAATGAAAATGGGATCCTTCTGAGCAACACATCAGAGCCAGCTATTGCTAAGCAGCACAAATTTGAAGATCTAACACCAGGCAAGAAATACAAGATACAAATCTTAACTGTCAGTGGAAGTCTCTTTAGCAAGGAAGCCCAAGCTGAAGGCCGAACAGTCCCAGCAGCTGTCACCAATCTGAGGATCACAGAAAATTCCACTAGACATCTATCCTTCAGCTGGACTGCTTCAGAGGGGGAACTCAACTGGTACAACATCTTTCTGTACAACCCAGATCGAACTCTTCAGGAAAGAGCACAAGTTGACCCACTAGTCCAGAGCTTCTCTTTCCAGAACTTGCTACAAGGCCGAATGTACAAAATGGTGATTGTAACTCACAGTGGGGAGCTGTCTAATGAGTCATTCATATTTGGCAGAACAGTCCCAGCCCCGGTGAGTCATCTCAAGGGATCAAATGGAAACATGACAGATAGCCTTTGGTTCACCTGGACTCCAGCCCCTGGGGACCTCGACTTTTATGAACTGATTCTCTACAATCCTAATGGCACTAAGAAGGAAAACTGGAAACACAGGGACCTGAAAGAGTGGCGTTTTCACGGCCTTGTCCCTGGGAGGAAGTACACACTGTGTGTGGTGACTCATAGTGGGGATCTCAGCAACAGGATCACAGGGGAGGGCAGAACAGCCCCAAGTCCTCCCAGTCTTTTGTCATTTGCTGATGTTGCAAATACATCCTTGGCCATTACCTGGAAGGGACCCCCAGATTGGACAGACTACAATGACTTTGAGTTGCAGTGGCTCCCCAGAGATGCACTCACAATCTTCAACCCCTACAGCAACAAAAAATCAGAAGGACGCATTGTGTATGGTCTTCGTCCAGGGAGATCCTATCAATTCAACGTCAAGACTGTCAGTGGTGATACCTGGAAAACCTACAGCAAACCAATTTCTGGATCTGTGAGAACAAAGCCTGACAAGATACAAAATCTTCACTGCCGCCCTCAGAACTCAACAGCCATTGCCTGTTCTTGGATTCCTCCTGATTCAGACTTCGATGGGTATAGCATTGAATGTCGCAAAATGGATACCCAAGAAATTGAGTTTTCCAAAAAGCTGGAGAAAGAAAAATCTCTGCTCAACATCATGATGCTGGTACCCCATAAGAGATACCTGGTGTCCATCAAGGTGCAGTCAGCCGGTGTGACCAGCGAGGTGGTTGAAGACAGCACCATCACAATGATAGATCGCCCGCCTCCTCCACCTCCGCATATTCGTGTGAATGAAAAGGATGCACTAATTAGCAAATCTTCCATCAACTTTACTGTCAACTGCAGCTGGTTCAGTGACACCAACGGAGCTGTGAAATACTTCACAGTGGTGGTGAGAGAGGCTGATGGCAGTGATGAGCTGAAGCCAGAACAACAGCACCCTCTCCCTTCCTACCTGGAATATAGGCACAATGCCTCCATTCGAGTGTATCAGACCAATTATTTTGCCAGCAAATGTGTCGAAAGTCCGGACAGCAATTCCAAGAGTTTTAACATTAAGCTTGGAGCAGAGATGGACAGCCTAGGTGGAAAATGTGATCCCAACCAGCAAAAATTCTGTGACGGACCACTGAAGCCACATACTGCCTACAGAATCAGCATTCGGGCATTTACTCAGTTATTTGATGAGGACCTGAAAGAGTTCACAAAGCCCCTCTATTCAGACACATTTTTCTCCTTGCCTATCACCACAGAGTCAGAGCCCTTGTTTGGAGTTATCGAAGGTGTTAGTGCTGGCCTCTTTCTAATTGGCATGCTGGTAGCCCTTGTTGCCTTTTTCATCTGCAGGCAGAAAGTGAGCCATGGTAGAGAAAGGCCCTCCGCACGCTTGAGCATTCGCAGGGATCGACCACTGTCTGTCCACTTGAATCTGGGCCAAAAAGGTTGCCGGAAAACTTCTTGCCCCATAAAAGTAAATCAATTTGAAGGGCATTTCATGAAGCTTCAGGCTGACTCCAATTACTTGTTATCCAAGGAATATGAGGACTTAAAAGACGTGGGTCGAAACCAGTCTTGTGATATTGCACTCCTGCCTGAGAATAGAGGAAAAAATCGATACAACAATATATTGCCATATGATGCCTCACGAGTAAAGCTGTCCAATGTGGATGATGACCCTTGCTCTGACTACATCAATGCCAGCTACATCCCAGGCAACAACTTCAGACGAGAATATATCGCCACTCAGGGACCGCTTCCTGGCACCAAGGATGACTTCTGGAAAATGGCATGGGAACAGAATGTCCTCAATATTGTCATGGTGACCCAGTGTGTTGAGAAGGGTCGAGTGAAGTGTGACCATTACTGGCCAGCAGATCAGGACTCCCTCTACTATGGGGACCTCATCCTGCAGATGCTCTCCGAGTCTGTGCTGCCTGAGTGGACCATCAGGGAGTTTAAGATATGCAGTGAGGAACAGCTTGATGTACAAAGACTCATCCGTCACTTTCACTATACGGTGTGGCCAGACCACGGCGTCCCTGAGACCACGCAGTCCTTGATCCAGTTTGTGAGAACTGTCAGGGACTACATCAATAGGACCCCTGGTGCTGGGCCCACCGTGGTGCATTGCAGTGCTGGTGTGGGTAGGACTGGAACCTTTATTGCACTGGACCGAATCCTCCAGCAATTAGACTCCAAAGACTCTGTGGACATTTATGGAGCAGTGCATGACCTAAGACTTCACAGGGTTCACATGGTCCAGACGGAGTGTCAGTACATATACCTACATCAGTGTGTAAGAGATGTACTCAGAGCAAGGAAGCTACGGAGTGAACAAGAAAACCCCCTGTTTCCGATCTATGAAAATGTGAATCCAGAGTATCACAGAGATGCAGTCTATTCAAGACATTAA

Related Sequences

XP_004845104.1 Protein

Ptprb PREDICTED: receptor-type tyrosine-protein phosphatase beta isoform X2 [Heterocephalus glaber]

Length: 1998 aa      View alignments
>XP_004845104.1
MLSHGTGLALWITLSLLQTGLVASARCNFTLTESRVSSLWVSVQWRTLGSPCNFSVIYSSDTSRSVWCRVTRIDNTTYGCNPKDLQAGTTYNFRIVSLDGEERSVVLQTDPLPPARFEVNKEKITSTSLQVWWTHSPGKVTWYEVQLFDDNNKKIQGVQIQESTSWNEYTFFNLTAGNNYNIAITAVSGDKHSSTIYTNASTAPSPVKDIDISTKTNSLLVSWSHGSGNVERYRLMLTDRDALVHDSIVDKQDTSYTFRGLIPGHLYNLTVVTMAAGLQNHKWKLVRTVPMEVSNLKVTNDGSLTSLKVKWQRPPGNIDAYNITLSHQGTIKESRILAPQVIETHFKDLAPGRLYQVIISCISGELSAQKMAVGRTVPDKVGNLEAKNNDRMSSLLVSWSPPAGDWEQYRIVLLNDSSVLLNTTVGKEKTHYVIDHEGLIPGRQYEVEVTVESGNLKNSEHCQGRTVPLAVLQLRVKHANESSLGIMWQTPVAEWEKYIISLADRDLLLIHKSLSKDTKEFTFTDLVPGRKYTATVTSISGDLKNSSSIKGRTVPAQVTDLQVANQGMTSSLFANWTGALGDTEFYQVLLIHENVVIKNESVSSETNRYSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPCSVSGVTVNNLGRNDYLSVSWLPAPGDVDNYVVMLSHYGKVVQSLVIAKSVSECSFSSLTPGRLYNVTITTRSGKYENHSFGQERTVPDKVQGVSVSNSARSDYLRVSWVHATGDFDHYEVTIKNKNNFIQTKSIPKSENECVFVQLVPGRLYSITVSTKSGQYEASEQGNGRTMPEPVRNLTLRNRTTEDLHVTWSRADGDVDQYEIQLLFNDMKVFPSFHLVNTATEFWFTSLTPGRQYKILVLTISGDVQQSAFIEGLTVPSAVKNVHISPNGATDSLTVTWTPGSGDVDSYVVSAFRQNQKVESQTIPKHVSEHTFHRLEAGEQYQIAIASVSGSLRNQKDAFGRTVPASVQRINADNAYSSHSLIVSWQKAIGVAERYDILLLNENGILLSNTSEPAIAKQHKFEDLTPGKKYKIQILTVSGSLFSKEAQAEGRTVPAAVTNLRITENSTRHLSFSWTASEGELNWYNIFLYNPDRTLQERAQVDPLVQSFSFQNLLQGRMYKMVIVTHSGELSNESFIFGRTVPAPVSHLKGSNGNMTDSLWFTWTPAPGDLDFYELILYNPNGTKKENWKHRDLKEWRFHGLVPGRKYTLCVVTHSGDLSNRITGEGRTAPSPPSLLSFADVANTSLAITWKGPPDWTDYNDFELQWLPRDALTIFNPYSNKKSEGRIVYGLRPGRSYQFNVKTVSGDTWKTYSKPISGSVRTKPDKIQNLHCRPQNSTAIACSWIPPDSDFDGYSIECRKMDTQEIEFSKKLEKEKSLLNIMMLVPHKRYLVSIKVQSAGVTSEVVEDSTITMIDRPPPPPPHIRVNEKDALISKSSINFTVNCSWFSDTNGAVKYFTVVVREADGSDELKPEQQHPLPSYLEYRHNASIRVYQTNYFASKCVESPDSNSKSFNIKLGAEMDSLGGKCDPNQQKFCDGPLKPHTAYRISIRAFTQLFDEDLKEFTKPLYSDTFFSLPITTESEPLFGVIEGVSAGLFLIGMLVALVAFFICRQKVSHGRERPSARLSIRRDRPLSVHLNLGQKGCRKTSCPIKVNQFEGHFMKLQADSNYLLSKEYEDLKDVGRNQSCDIALLPENRGKNRYNNILPYDASRVKLSNVDDDPCSDYINASYIPGNNFRREYIATQGPLPGTKDDFWKMAWEQNVLNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKICSEEQLDVQRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRTPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYIYLHQCVRDVLRARKLRSEQENPLFPIYENVNPEYHRDAVYSRH