Details from NCBI annotation

Gene Symbol Syt1
Gene Name synaptotagmin I, transcript variant X4
Entrez Gene ID 101701697

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYT1 ENSCPOG00000002054 (Guinea pig)

Gene Details

synaptotagmin I

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001859, Guinea pig)

Protein Percentage 99.29%
CDS Percentage 96.76%
Ka/Ks Ratio 0.02703 (Ka = 0.0033, Ks = 0.1222)

SYT1 ENSG00000067715 (Human)

Gene Details

synaptotagmin I

External Links

Gene Match (Ensembl Protein ID: ENSP00000261205, Human)

Protein Percentage 99.53%
CDS Percentage 94.71%
Ka/Ks Ratio 0.01011 (Ka = 0.0022, Ks = 0.2202)

Syt1 ENSMUSG00000035864 (Mouse)

Gene Details

synaptotagmin I

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000100912, Mouse)

Protein Percentage 97.86%
CDS Percentage 90.97%
Ka/Ks Ratio 0.02273 (Ka = 0.0099, Ks = 0.4364)

Syt1 ENSRNOG00000006426 (Rat)

Gene Details

synaptotagmin I (Syt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049624, Rat)

Protein Percentage 98.1%
CDS Percentage 90.5%
Ka/Ks Ratio 0.01746 (Ka = 0.0087, Ks = 0.497)

Genome Location

Sequence Coding sequence

Length: 1269 bp    Location: 19314232..18776067   Strand: -
>XM_004844998.1
ATGGTGAGCGAGAGTCATCATGAGGCCTTGGCAGCCCCGCCAGTCACCACTGTTGCAACTATTCTACCAAATAATGCCACAGAGCCAGCCAGTCCTGGCGAAGGAAAGGAAGATGCCTTTTCTAAACTGAAGGAGAAGTTTATGAATGAGCTGCATAAAATTCCATTGCCACCGTGGGCCTTAATTGCCATAGCCATAGTTGCAGTCCTTTTAGTCCTGACCTGCTGCTTTTGTATCTGTAAGAAATGTTTGTTCAAAAAGAAAAACAAGAAGAAGGGAAAGGAAAAGGGAGGAAAGAATGCCATTAACATGAAAGATGTGAAAGACTTAGGGAAGACCATGAAAGATCAGGCCCTCAAGGATGATGATGCTGAAACTGGATTGACTGATGGAGAAGAAAAAGAAGAACCCAAAGAGGAGGAGAAGCTGGGAAAGCTTCAGTATTCATTGGATTATGATTTCCAGAATAACCAGCTGCTGGTAGGGATCATCCAGGCTGCTGAACTACCTGCCTTGGACATGGGAGGAACATCTGATCCTTATGTGAAAGTGTTTCTGCTCCCTGATAAAAAGAAGAAATTTGAGACAAAAGTCCACCGAAAAACCCTTAATCCTGTCTTCAATGAGCAATTTACTTTCAAGGTGCCATACTCGGAATTGGGTGGCAAAACTCTGGTGATGGCTGTCTATGATTTTGATCGTTTCTCCAAGCATGACATTATTGGAGAATTCAAAGTCCCCATGAACACTGTGGATTTTGGTCACGTAACCGAGGAATGGCGTGATCTGCAAAGTGCTGAGAAGGAAGAGCAAGAGAAGTTGGGTGACATCTGCTTCTCCCTCCGCTATGTCCCTACTGCTGGAAAGCTGACCGTTGTCATTCTGGAGGCAAAGAACCTGAAGAAGATGGATGTGGGTGGCCTATCTGATCCTTATGTGAAGATTCATCTGATGCAGAATGGCAAGAGGCTGAAGAAGAAAAAGACAACAATTAAAAAGAACACACTTAACCCCTACTACAATGAGTCATTCAGCTTTGAAGTACCTTTCGAGCAAATCCAGAAAGTGCAAGTGGTGGTAACTGTTTTGGACTATGACAAGATTGGCAAGAATGATGCCATCGGCAAAGTCTTTGTGGGCTACAACAGCACTGGCGCGGAGCTGCGACACTGGTCAGACATGCTGGCCAACCCCAGGCGACCCATCGCCCAGTGGCACACCCTACAGGTAGAGGAGGAAGTGGATGCCATGCTGGCCGTCAAGAAGTAA

Related Sequences

XP_004845055.1 Protein

Syt1 PREDICTED: synaptotagmin-1 isoform X4 [Heterocephalus glaber]

Length: 422 aa      View alignments
>XP_004845055.1
MVSESHHEALAAPPVTTVATILPNNATEPASPGEGKEDAFSKLKEKFMNELHKIPLPPWALIAIAIVAVLLVLTCCFCICKKCLFKKKNKKKGKEKGGKNAINMKDVKDLGKTMKDQALKDDDAETGLTDGEEKEEPKEEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK