Details from NCBI annotation

Gene Symbol Ccdc53
Gene Name coiled-coil domain containing 53, transcript variant X1
Entrez Gene ID 101709358

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC53 ENSCPOG00000011893 (Guinea pig)

Gene Details

coiled-coil domain containing 53

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010699, Guinea pig)

Protein Percentage 85.94%
CDS Percentage 86.11%
Ka/Ks Ratio 0.13462 (Ka = 0.0724, Ks = 0.538)

CCDC53 ENSG00000120860 (Human)

Gene Details

coiled-coil domain containing 53

External Links

Gene Match (Ensembl Protein ID: ENSP00000240079, Human)

Protein Percentage 87.5%
CDS Percentage 84.03%
Ka/Ks Ratio 0.09832 (Ka = 0.0673, Ks = 0.6844)

Ccdc53 ENSMUSG00000020056 (Mouse)

Gene Details

coiled-coil domain containing 53

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020248, Mouse)

Protein Percentage 83.33%
CDS Percentage 79.86%
Ka/Ks Ratio 0.08541 (Ka = 0.0956, Ks = 1.1192)

Ccdc53 ENSRNOG00000005102 (Rat)

Gene Details

coiled-coil domain containing 53 (Ccdc53), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006903, Rat)

Protein Percentage 80.73%
CDS Percentage 79.51%
Ka/Ks Ratio 0.12684 (Ka = 0.118, Ks = 0.9306)

Genome Location

Sequence Coding sequence

Length: 579 bp    Location: 6216278..6248526   Strand: +
>XM_004844847.1
ATGGACGAGGACGGGCTCCCCCTCATGGGGTCGGGCATAGACTTGACCAAGGTGCCGGCGATCCAGCAAAAGAGGACGGTGGCGTTTCTAAACCAGTTCGTGGTGCACACCGTGCAGTTCCTCAACCGCTTTGCCACGGTGTGCGAGGAGAAACTGGCAAACCTCTCTCTTCGGATCCAACAAATTGAAACAACTCTCAATATTTTAGATGCAAAGCTGTCGTCCATTCCGGGCCTGGATGAGGTGACATTTGAAGCATCTTCGTTAAGTGTCACCAGCGTCCCAGACAGACCCCATTCCGAAGCCACTTCGGAGCAGGCCCAGCAGAACAATACACAAGACTCTGGAGCACAGGAAAGTGAAGTATCAGAAAACACCGTAACTGTGGCTGAGGACCCCAGATATGCCAGATATCTCAAAATGGTTCACGTGGGAGTTCCGGTGATGGCGATAAGAAACAAAATGATATCAGAAGGACTAGACCCAGATCTGCTTGAGAGGCCGGACGCAACCGTGCCTGACGGCGGCAGCGAGAGGACCATGGGAGAGAGCTCAGACAGCGAGTCCTTCAGCGACTGA

Related Sequences

XP_004844904.1 Protein

Ccdc53 PREDICTED: WASH complex subunit CCDC53 isoform X1 [Heterocephalus glaber]

Length: 192 aa      View alignments
>XP_004844904.1
MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFATVCEEKLANLSLRIQQIETTLNILDAKLSSIPGLDEVTFEASSLSVTSVPDRPHSEATSEQAQQNNTQDSGAQESEVSENTVTVAEDPRYARYLKMVHVGVPVMAIRNKMISEGLDPDLLERPDATVPDGGSERTMGESSDSESFSD