Sequence details NCBI ID: XM_004844837.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hsp90b1
Gene Name heat shock protein 90kDa beta (Grp94), member 1, transcript variant X2
Entrez Gene ID 101704175

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HSP90B1 ENSCPOG00000008388 (Guinea pig)

Gene Details

heat shock protein 90kDa beta (Grp94), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007541, Guinea pig)

Protein Percentage 90.4%
CDS Percentage 84.79%
Ka/Ks Ratio 0.07357 (Ka = 0.06, Ks = 0.816)

HSP90B1 ENSG00000166598 (Human)

Gene Details

heat shock protein 90kDa beta (Grp94), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000299767, Human)

Protein Percentage 97.88%
CDS Percentage 89.58%
Ka/Ks Ratio 0.01937 (Ka = 0.0109, Ks = 0.5646)

Hsp90b1 ENSMUSG00000020048 (Mouse)

Gene Details

heat shock protein 90, beta (Grp94), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020238, Mouse)

Protein Percentage 97.26%
CDS Percentage 88.11%
Ka/Ks Ratio 0.01718 (Ka = 0.0124, Ks = 0.7242)

Hsp90b1 ENSRNOG00000026963 (Rat)

Gene Details

heat shock protein 90, beta, member 1 (Hsp90b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034846, Rat)

Protein Percentage 96.01%
CDS Percentage 87.09%
Ka/Ks Ratio 0.02653 (Ka = 0.0209, Ks = 0.7886)

Genome Location

Sequence Coding sequence

Length: 2418 bp    Location: 4752219..4738563   Strand: -
Raw sequence   
>XM_004844837.1
ATGAGGGCCCTGTGGGTGCTGGGCCTGTGCTGCGTCCTGCTGACCTTCGGGTCGGTCAGAGCTGACGATGAAGTCGATGTGGATGGCACCGTAGAAGAGGACCTGGGTAAAAGCCGCGAAGGCTCAAGGACAGATGATGAAGTAGTACAGAGAGAGGAAGAAGCCATACAATTGGATGGATTAAATGCATCACAAATACGAGAACTTAGAGAGAAATCTGAAAAGTTTGCCTTCCAAGCTGAAGTTAACAGGATGATGAAACTTATCATCAATTCATTGTATAAAAATAAAGAGATTTTCCTTCGAGAGCTGATTTCAAATGCTTCAGATGCTCTAGATAAGATAAGGCTAATATCACTAACTGATGAGAATGCGCTTTCTGGAAATGAGGAACTGACGGTCAAAATTAAGTGTGACAAAGAGAAAAACCTGCTGCACGTCACGGACACCGGTGTAGGAATGACCAGAGAAGAGTTGGTTAAAAACCTCGGTACCATAGCCAAATCTGGGACAAGTGAATTTTTAAATAAAATGACTGAGGCCCAAGAAGATGGCCAGTCAACCTCTGAACTGATCGGCCAGTTTGGCGTTGGCTTCTATTCCGCCTTCCTTGTGGCAGATAAGGTTATTGTCACATCAAAACACAACAATGACACCCAGCACATCTGGGAATCGGACTCCAATGAATTTTCAGTAATTGCTGACCCTAGAGGAAACACCCTGGGACGGGGAACAACAATTACCCTTGTCTTGAAAGAAGAAGCGTCTGATTACCTTGAGTTGGATACAATTAAAAATCTCGTCAAAAAGTATTCACAGTTCATAAACTTCCCTATCTATGTATGGAGCAGCAAGACTGAAACTGTCGAGGAGCCCCTAGAAGAAGAGGAAGCAGCAAAAGAAGAGAAAGAAGAATCAGATGATGAAGCCGCAGTAGAGGAGGAGGAAGAAGAAAAGAAGCCCAAAACTAAGAAAGTTGAAAAAACTGTATGGGATTGGGAACTTATGAATGATATCAAACCAATATGGCAGAGACCATCAAAAGAAGTAGAAGAAGATGAATACAAAGCTTTCTACAAATCATTTTCAAAGGAAAACGATGACCCAATGGCTTACATCCACTTCACTGCCGAAGGGGAGGTGACCTTCAAGTCCATCTTGTTTGTGCCCACGTCTGCCCCGCGTGGCCTCTTTGACGAGTATGGATCTAAGAAGAGCGATTACATTAAGCTGTACGTGCGCCGAGTGTTCATCACGGACGACTTCCATGATATGATGCCCAAGTACCTGAACTTCGTCAAGGGTGTGGTGGACTCGGACGATCTCCCTCTGAACGTGTCCCGAGAGACTCTGCAGCAGCACAAGCTGCTCAAGGTGATTAGGAAGAAGCTTGTCCGTAAAACTCTGGACATGATCAAGAAGATTGCTGATGAGAAATACAGTGATACTTTTTGGAAAGAATTCGGCACCAACATCAAGCTCGGTGTGATCGAAGACCACTCGAACCGCACTCGCCTTGCTAAACTTCTTCGGTTCCAGTCTTCTCATCACCCGACCGACATTACCAGTCTAGATCAGTATGTGGAGAGAATGAAGGAAAAACAGGATAAAATCTACTTCATGGCCGGATCCAGCAGGAAAGAGGCTGAATCTTCTCCCTTTGTTGAGCGGCTTCTGAAGAAAGGCTATGAGGTTATTTACCTCACGGAGCCTGTGGACGAATATTGCATCCAGGCCCTTCCCGAGTTTGATGGGAAAAGGTTTCAGAACGTTGCCAAGGAAGGAGTGAAATTTGATGAGAGCGAGAAAACCAAGGAGAGTCGGGAAGCAACCGAGAAGGAATTTGAGCCTCTGCTGAACTGGATGAAAGACAAGGCCCTGAAGGACAAGATTGAAAAGGCCGTGGTGTCGCAGCGCCTGACGGAGTCTCCATGTGCCCTCGTGGCCAGCCAGTATGGCTGGTCTGGCAACATGGAGAGGATCATGAAAGCACAAGCGTACCAGACAGGCAAGGACATCTCCACAAACTACTATGCCAGCCAGAAGAAAACATTCGAGATCAACCCCAGGCACCCCCTGATCAGAGACATGCTCCGGCGCATTAAGGAAGACGAGGATGACAAAACCGTTGTGGATCTGGCTGTGGTTCTGTTTGAAACGGCGACTCTTCGGTCAGGATATCTACTACCAGACACCAAAGCCTATGGAGACAGGATAGAAAGAATGCTTCGCCTCAGTCTAAACATTGACCCGGAAGCAAAGGTTGAAGAAGAACCAGAGGAAGAGCCGGAAGACACAGCGGAAGACACGGAGCAAGAGGACACTGAGCAAGACGAAGAAGAAGAAGTGGATGCAGGTGCGGATGACGAAGAGCAGGAGACAGTGAAGAAATCTACAGCTGACAAAGACGAATTGTAA

Related Sequences

XP_004844894.1 Protein

Hsp90b1 PREDICTED: endoplasmin isoform X2 [Heterocephalus glaber]

Length: 805 aa      View alignments
>XP_004844894.1
MRALWVLGLCCVLLTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPLEEEEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKENDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYSDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRIKEDEDDKTVVDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPEAKVEEEPEEEPEDTAEDTEQEDTEQDEEEEVDAGADDEEQETVKKSTADKDEL