Details from NCBI annotation

Gene Symbol Ccdc142
Gene Name coiled-coil domain containing 142, transcript variant X1
Entrez Gene ID 101698719

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC142 ENSCPOG00000023486 (Guinea pig)

Gene Details

coiled-coil domain containing 142

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020518, Guinea pig)

Protein Percentage 83.18%
CDS Percentage 87.47%
Ka/Ks Ratio 0.45444 (Ka = 0.1049, Ks = 0.2308)

CCDC142 ENSG00000135637 (Human)

Gene Details

coiled-coil domain containing 142

External Links

Gene Match (Ensembl Protein ID: ENSP00000290418, Human)

Protein Percentage 76.56%
CDS Percentage 82.61%
Ka/Ks Ratio 0.39988 (Ka = 0.1477, Ks = 0.3694)

Ccdc142 ENSMUSG00000079511 (Mouse)

Gene Details

coiled-coil domain containing 142

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000098812, Mouse)

Protein Percentage 70.91%
CDS Percentage 76.32%
Ka/Ks Ratio 0.32491 (Ka = 0.2019, Ks = 0.6215)

Ccdc142 ENSRNOG00000022326 (Rat)

Gene Details

Protein Ccdc142

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063467, Rat)

Protein Percentage 70.56%
CDS Percentage 75.65%
Ka/Ks Ratio 0.35726 (Ka = 0.217, Ks = 0.6075)

Genome Location

Sequence Coding sequence

Length: 2286 bp    Location: 29026730..29034420   Strand: +
>XM_004844673.1
ATGGCCCAGGCATCCCGCTCTGGTGGCCTTCTGCCCCCTCTGTGGGCGCAACCCGGGGGCGCTGGGGAGGGGCAATGGGAGGGAAGGCGGGCGGGCGCTCTCCGCGGGGAGGGTCGTGGCCTACAGGGGCAACCGATTGCCGGGAGCATCCCCTGCCCGGACCTCCGGCCCGGCGGAGCTCCGAGAGGACCACCGTGGTGGCCCGCGTTGGCACACGCGGGCGAAGACAACGAGGCTGGCCCGGCGAGTTGGAAGCGGGAGCCTGCAGCAGGCACCCCGATCCCTCCAGCGCTGCAGCGTCTCCGTCGGGTGATGCTGCGGCTGCTCCGCGAGCGGGAGCAGCTTCTTCAGGCCAGGGACTGCGCCCGCCACCTACAGGCGGTCGTGCGCCTCCTGAAGACCCTGAGCCCCAGCACGTCCACCCACGGTCCTGGCCCCTTGTCCCAGCTGTGCCGCGACCTGCAGCTGCACCCTTCCCGAGAGGCGGTTGTGCGAATCCGCCAGCGGGACTCTCTCGAACCGCTACTTCTAGCGCGGCCCATCGGACTAGCGGCCCAACGTCTGGATGCTGCCATCAAGATGCAGCTTCGAGCTCTGGGTCGGGCTCCCGCCACTCTGACTCTGACATCCCAACTCGCCGAGCTGCTGCTGCTGCTTCCTGTCTACCACAGGCTGCAGGGAAAAGCCATGAGCCAAATTCCAGGAGCAGCGCGCCCTTTCCCCTCGGCCAGTGTGCTTTGTCTTCTAACCGAGGAGCGAGGTTGCCAGATGGCAAGTCGGCTAGATGAGGCACTCAGGGGACTGTGCTTGCGGGACCAGCTCCGCAGGCACTGCCAGGAGGAGCGGGAGCTGCTACCAGGGTTACTGGTTATAGTAGGGGGCGTGACCGGTTCAGTCAGCAGTGGGCTGGGGCTTGGAGGAGCTGGAGCCCTTTGGAACCAATATTGGACGCTTCTTTGGGCAGCCTGCGCACAGAGTCTGGACCTAAATCTAGGACCCTGGAGGGAACACAGGGCAGTGGCACAACAGCTGAGTGAGGCACTGGTTCAGGCATCCCTGCCTCAGGAGTGTGTGAAGGAGCTGGCTTCTTTGTGCCACAACCTACTTCATCAGTCTCATATCTGGAGCTGGGATCAAGGTTTCTGCCAGGCCTTGGCATCTGCAGCCCTTGGGGATCAGAGCAGCCCTGCCTCGACCTCTCATACTGCTGAACTGTTGCGACAGCTTTTTCCTCCACTCTTAGACACCATCCAAGAATGTAGGTCAGGATTGATCCTCTGTCAGCCTCCAGGCCCAGCACCTATTGCCCTAGGGCTCTGTACTCTGCAGATCACCTTGCTCTGGTTCTTGGGCAGAACTCAGCAACACCTGGCAGCATGGGCCCCAGATTCCTTCCTGCTCCTGATCCAAAATCACTTACCTCCTCTATTGCATGAGGCAGAAGCTTTATCCAGATTGACTTCAGAGGAAAGCTTAACTCTGGCAGTGGAGCAGCAGCTAGGCCTGGAGATCCAGAAGCTGACTGCACAGATGCAGCTCCTGCCTGAAGAGTCACTAAGTCTTTTTTTCCAAGAATGTCATAAACAAGCCACACAGGGCTTCAAGCTTTACATGCCACAGGGTCGGTACTGGAGGCTTCATCTCTGTCCTGGACTTCCCCGAGTTCCTAGTGAGTATGCTGGGTTGGTGGTTCGAACCGTACTGGAGCCTGTGTTGAAAGGAGTACAGGGATTGCCACCTCAAGCCCAGGCCCTCGGCCTCAGTCAGGCGCTGACAGCCATCCTGGGTGCCTGGCTGGACCACATCCTTACCCATGGGATCCGGTTCAGCCTGCAGGGGGCGCTGCAGCTCAGACAAGACTTCGGAGTGGTCAGGGAGTTGCTGGAAGAAGAGCAGTGGGATCTGTCACCAGAGCTTCGCCATACTCTGCTCATGCTCAGCATTTTCCAGCAGCTAGATGGGGCCTTGCTGTGTCTATTGCAGCAGCCCCTGCCTAAGACTCGAGTCCACAGGAGGTCTCCTTGTTGCTGTGTTTGTAATGAAGTCCAGACCACAGGATTGGCCAGCAGCAGCCTCAACAGCCTGGAGAACTTGGAGCCCCCTCTACTGCCTGGAGTACCCCCATCCCAGACAATGCCCTTGCAAAGCACCCCGGGAAGTGGAAGACCTAGCCTTGAGGCTTATCTAGTAGAAAATCAGCAGGCCTGGCTTGCCCTTAGGCAGCACCAGCACCCTCGTTGGCACCTGCCTTTTCTTTCCTGCCTGGGGATCAGTCCTGAATCCTAA

Related Sequences

XP_004844730.1 Protein

Ccdc142 PREDICTED: coiled-coil domain-containing protein 142 isoform X1 [Heterocephalus glaber]

Length: 761 aa      View alignments
>XP_004844730.1
MAQASRSGGLLPPLWAQPGGAGEGQWEGRRAGALRGEGRGLQGQPIAGSIPCPDLRPGGAPRGPPWWPALAHAGEDNEAGPASWKREPAAGTPIPPALQRLRRVMLRLLREREQLLQARDCARHLQAVVRLLKTLSPSTSTHGPGPLSQLCRDLQLHPSREAVVRIRQRDSLEPLLLARPIGLAAQRLDAAIKMQLRALGRAPATLTLTSQLAELLLLLPVYHRLQGKAMSQIPGAARPFPSASVLCLLTEERGCQMASRLDEALRGLCLRDQLRRHCQEERELLPGLLVIVGGVTGSVSSGLGLGGAGALWNQYWTLLWAACAQSLDLNLGPWREHRAVAQQLSEALVQASLPQECVKELASLCHNLLHQSHIWSWDQGFCQALASAALGDQSSPASTSHTAELLRQLFPPLLDTIQECRSGLILCQPPGPAPIALGLCTLQITLLWFLGRTQQHLAAWAPDSFLLLIQNHLPPLLHEAEALSRLTSEESLTLAVEQQLGLEIQKLTAQMQLLPEESLSLFFQECHKQATQGFKLYMPQGRYWRLHLCPGLPRVPSEYAGLVVRTVLEPVLKGVQGLPPQAQALGLSQALTAILGAWLDHILTHGIRFSLQGALQLRQDFGVVRELLEEEQWDLSPELRHTLLMLSIFQQLDGALLCLLQQPLPKTRVHRRSPCCCVCNEVQTTGLASSSLNSLENLEPPLLPGVPPSQTMPLQSTPGSGRPSLEAYLVENQQAWLALRQHQHPRWHLPFLSCLGISPES