Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101700883

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

USP39 ENSCPOG00000009315 (Guinea pig)

Gene Details

ubiquitin specific peptidase 39

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008360, Guinea pig)

Protein Percentage 98.41%
CDS Percentage 92.8%
Ka/Ks Ratio 0.02265 (Ka = 0.0073, Ks = 0.3219)

USP39 ENSG00000168883 (Human)

Gene Details

ubiquitin specific peptidase 39

External Links

Gene Match (Ensembl Protein ID: ENSP00000312981, Human)

Protein Percentage 97.17%
CDS Percentage 92.57%
Ka/Ks Ratio 0.04299 (Ka = 0.0142, Ks = 0.3304)

Usp39 ENSMUSG00000056305 (Mouse)

Gene Details

ubiquitin specific peptidase 39

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064515, Mouse)

Protein Percentage 96.45%
CDS Percentage 89.48%
Ka/Ks Ratio 0.03025 (Ka = 0.0163, Ks = 0.538)

USP39 ENSRNOG00000010930 (Rat)

Gene Details

U4/U6.U5 tri-snRNP-associated protein 2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015563, Rat)

Protein Percentage 93.79%
CDS Percentage 87.0%
Ka/Ks Ratio 0.06017 (Ka = 0.0385, Ks = 0.6396)

Genome Location

Sequence Coding sequence

Length: 1698 bp    Location: 17526749..17500780   Strand: -
>XM_004844598.1
ATGTCCAGTCGGTCTAAGCGGGAGTCTCGTGGTTCCACCCGCGGGAAGCGCGAGTCCGAATCGCGGAGCAGCTCGGGTCGCGTAAAGCGGGAGCGAGATCGGGAGCGGGAGCCTGATCCGGCAAGCTCACGGGGCAGCCCGGTGCGCGTGAAGCGGGAGGTCGAGCCGGCGAGTGCGCGGGATGCCCCGGCACCCCCAATCCCAGCGGTGCGGGTGAAGCGGGAACGCGAGGCCGACGAGGACTCGGAGCCCGAGCGGGAGGTGCGAGCAAAGAATGGCCGTGTGGATTCTGAGGACAGGAGGAGCCGCCACTGTCCATACCTAGATACCATTAACAGGAGTGTACTGGATTTTGACTTTGAGAAANNCTGCTCCATCTCCCTCTCGCATATCAATGCAAATGCCTGTCTGGTGTGTGGCAAGTACTTTCAAGGCCGGGGTTTGAAGTCTCATGCCTACATTCACAGCGTCCAATTTAGCCACCATGTCTTCCTCAACCTCCACACCCTCAAGTTCTACTGCCTTCCAGACAACTATGAGATCATCGATTCCTCACTGGAGGACATCACGTATGTGTTGAAGCCTACTTTCACGAAGCAGCAGATTGCAAACTTGGACAAGCAAGCCAAATTGTCCCGGGCATATGATGGTACCACTTACCTACCGGGTATCGTGGGACTGAATAACATAAAGGCCAATGACTATGCCAATGCTGTCCTTCAGGCTCTGTCTAATGTTCCTCCTCTCCGGAACTACTTCCTGGAAGAAGATAATTATAAGAACATCAAGCGCCCCCCAGGGGATATCATGTTCTTGCTGGTGCAGCGTTTTGGAGAGCTGATGAGAAAGTTGTGGAACCCTCGGAATTTCAAGGCACACGTCTCTCCCCATGAGATGCTTCAGGCTGTTGTCCTTTGCAGCAAAAAGACTTTTCAGATCACCAAGCAAGGTGATGGAGTTGACTTCCTGTCTTGGTTTCTGAATGCCCTACACTCTGCTCTGGGGGGCACAAAGAAGAAAAAGAAGACTATTGTGACTGATGTTTTCCAGGGATCTATGAGGATCTTCACTAAAAAGCTTCCCCATCCTGATCTGCCAGCAGAAGAAAAAGAGCAGCTGCTCCATAATGATGAGTACCAGGAGACGATGGTAGAGTCCACATTTATGTACCTGACGCTGGACCTTCCAACTGCCCCACTCTACAAGGACGAGAAGGAGCAGCTCATTATCCCCCAGGTGCCACTCTTCAACATCCTGGCAAAGTTCAATGGCATCACTGAGAAGGAGTATAAGACTTACAAGGAGAACTTTCTGAAGCGCTTCCAGCTCACCAAGCTGCCTCCATATCTAATCTTTTGTATCAAGAGATTCACTAAGAACAACTTCTTTGTGGAGAAGAATCCAATGATTGTCAACTTCCCTATTACAAATGTGGATCTGAGAGAGTACTTGTCTGAAGAAGTACAAGCAGTCCACAAGAACACCACCTATGACCTCATTGCCAACATTGTGCATGACGGCAAGCCCTCAGAGGGCTCCTACCGGATCCACGTGCTCCATCATGGGACTGGCAAATGGTATGAATTACAAGATCTCCAGGTGACAGACATCCTGCCCCAGATGATCACACTGTCGGAGGCTTACATTCAGATTTGGAAAAGGAGGGATAATGATGATGTCAACCAGCAGGGGGCTTGA

Related Sequences

XP_004844655.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 2 [Heterocephalus glaber]

Length: 565 aa      View alignments
>XP_004844655.1
MSSRSKRESRGSTRGKRESESRSSSGRVKRERDREREPDPASSRGSPVRVKREVEPASARDAPAPPIPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKXCSISLSHINANACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPMIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDDVNQQGA