Sequence details NCBI ID: XM_004841336.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hs2st1
Gene Name heparan sulfate 2-O-sulfotransferase 1, transcript variant X1
Entrez Gene ID 101706937

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000005010 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004510, Guinea pig)

Protein Percentage 91.29%
CDS Percentage 90.45%
Ka/Ks Ratio 0.18224 (Ka = 0.0551, Ks = 0.3023)

Hs2st1 ENSMUSG00000040151 (Mouse)

Gene Details

heparan sulfate 2-O-sulfotransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043066, Mouse)

Protein Percentage 95.79%
CDS Percentage 87.64%
Ka/Ks Ratio 0.03365 (Ka = 0.0211, Ks = 0.6263)

Hs2st1 ENSRNOG00000012549 (Rat)

Gene Details

heparan sulfate 2-O-sulfotransferase 1 (Hs2st1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016872, Rat)

Protein Percentage 95.79%
CDS Percentage 88.39%
Ka/Ks Ratio 0.04043 (Ka = 0.0233, Ks = 0.5769)

Genome Location

Sequence Coding sequence

Length: 1074 bp    Location: 10695939..10475747   Strand: -
Raw sequence   
>XM_004841336.1
ATGGGGCTCCTTAGGATTATGATGCCGCCCAAGTTGCAGCTGCTGGCGGTGGTGGCTTTTGCGGTGGCGATGCTCTTGCTGCTGAACCAGGTCCAGAAGCTGGAGGAGTCCCTGTCGAAGCTGGAAAGGGCAATCGCAAGACATGAAGTTCGAGAAATTGAGCAGCGACATACACTGGATGGACCTCGGCAAGATGCAGCTCTAGATGAGGAGGAAGACATGGTGATCATTTATAACAGAGTCCCCAAAACTGCAAGCACCTCATTTACAAATATCGCCTATGACTTATGTGCCAAGAATAAATACCATGTTCTTCACATCAACACTACCAAAAACAATCCGGTGATGTCTTTGCAAGACCAGGTGCGTTTTGTAAAGAATATAACTTCCTGGAAAGAGATGAAACCAGGGTTTTATCATGGACACATTTCTTATTTGGATTTTGCAAAATTTGGGGTGAAAAAGAAGCCAATTTACATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTACTATTATTTTCTGAGATTTGGAGATGATTATCGACCAGGATTAAGGAGACGAAAACAAGGAGACAAAAAGACTTTTGATGAATGTGTAGCTGAGGGCGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCATTCTTCTGTGGCCACAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAATCTAATTAATGAATACTTTCTGGTGGGAGTTACTGAAGAGCTTGAAGATTTTATCATGTTACTGGAGGCAGCTTTGCCCCGGTTTTTCAGGGGTGCTACAGAGCTCTATCGTACAGTAGGAAAGAAATCTCACCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTGCAGCAGTCTGACATTTGGAAAATGGAGAATGAGTTCTATGAATTTGCACTAGAGCAGTTCCAGTTCATCAGAGCCCATGCTGTTCGAGAAAAAGATGGAGACCTCTACATCCTTACACAAAACTTTTTCTATGAAAAGATTTACCCTAAATCGAACTGA

Related Sequences

XP_004841393.1 Protein

Hs2st1 PREDICTED: heparan sulfate 2-O-sulfotransferase 1 isoform X1 [Heterocephalus glaber]

Length: 357 aa      
>XP_004841393.1
MGLLRIMMPPKLQLLAVVAFAVAMLLLLNQVQKLEESLSKLERAIARHEVREIEQRHTLDGPRQDAALDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHISYLDFAKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTVGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIRAHAVREKDGDLYILTQNFFYEKIYPKSN