Sequence details NCBI ID: XM_004841284.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tgfbr3
Gene Name transforming growth factor, beta receptor III, transcript variant X2
Entrez Gene ID 101720371

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TGFBR3 ENSCPOG00000007217 (Guinea pig)

Gene Details

transforming growth factor, beta receptor III

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006506, Guinea pig)

Protein Percentage 91.0%
CDS Percentage 92.57%
Ka/Ks Ratio 0.27519 (Ka = 0.0466, Ks = 0.1692)

TGFBR3 ENSG00000069702 (Human)

Gene Details

transforming growth factor, beta receptor III

External Links

Gene Match (Ensembl Protein ID: ENSP00000212355, Human)

Protein Percentage 85.98%
CDS Percentage 88.42%
Ka/Ks Ratio 0.26825 (Ka = 0.0763, Ks = 0.2845)

Tgfbr3 ENSMUSG00000029287 (Mouse)

Gene Details

transforming growth factor, beta receptor III

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031224, Mouse)

Protein Percentage 82.74%
CDS Percentage 83.57%
Ka/Ks Ratio 0.17754 (Ka = 0.0955, Ks = 0.538)

Tgfbr3 ENSRNOG00000002093 (Rat)

Gene Details

transforming growth factor, beta receptor III (Tgfbr3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002867, Rat)

Protein Percentage 82.29%
CDS Percentage 83.55%
Ka/Ks Ratio 0.18149 (Ka = 0.0975, Ks = 0.5374)

Genome Location

Sequence Coding sequence

Length: 2553 bp    Location: 5871155..6078285   Strand: +
Raw sequence   
>XM_004841284.1
ATGACGTCCCATTATGTGATCACTGTGTTTGTCCTGATGAGCTCCTGTTTAGCCACTGCAGGTCCAGAGCCCAGTGCCCGGTGTGAACTGTCGCCTGTCAATGCCTCCCACCCTGTCCAGGCCTTGTTGGAGACCTTCAGTGTCCTGTCAGGCTGTGCCAGCAGAGGCACCACCAGGCTGCCGCAGGAGGTGCACGTCCTGAACCTTTGCACCGCTGAGAAGGGGCCTGGCCAGCCACAGAAAGAGGTCACGCTGCACCTGAAGCCTATCTCCTCAGTCTACATTCACCACAAGCCTGTTGTGTTTCTGCTCAACTCCCTGCAACCCCTGGTCTGGCATTTGAAAACAGAGAGACTCGCCACTGGGGTCCCCAGACTCTTCTTGGTGTCTGAGGGTTCTGTGGTCCAGTTTTCATCAGGAAACTTCTCCTTAACAGCAAAAACAGAAGAAAGGAACCTCCCCCATGGAAATGAACATCTGTTAAATTGGGCCCAAAAGGAGTATGGAGCAGTTACTTCATTTACCGAACTCAAGATAGCAAAAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTTCCTCCCACATGCAACATAGGGAAGAATTTTCTCTCACTCAATTACCTCGCTGGGTACCTTCAGCCCAAAGCTGCAGAAGGGTGTGTGATGTCCAGCCAGCCCCGGGATGAGGAAGTACACATCATCGAGATAATCACCCCCAACTCTAACCCTTACAGTGATTTCCAGGTGGATATAATAATTGACATAAGACCTTCTCCAGAGGATTCTACAGTGGTCAAAAATCTCATCCTGATCTTGAAGTGCAAAAAGTTTGTCAACTGGGTGATCAGATCTTTTGATGTTAAGGGGAACCTGAAAGTTATTGCTCCCAACAGTATTGGCTTTGGGAAAGAGAATGAAAGATCCATGACAATGACCAGATCAATAAGAAATGACATTCCTTCCACCCAAGAGAATTTGGTGAAGTGGGCTTTGGATAACGGCTATAGTCCAGTGACATCATACACACTGGCTCCGGTAGCTAACAGATTTCATGTTAGAGTTGAAAACAATGAGGAAATGAGAGATGAGGAAGTTCATACCATCCCTCCTGGGCTACAGATCCTGCTGGACCCAGTCATCCTGCCTGGCCCGGAGAACCCACCCTTCCAGGGAGGGGGTAGCCGAACTGGAGGTCTCCCCTTTCCTTTTCCTGATATCTCCAGGAGAGGCCGGAAGGAAGGAGGAGAAGATAGGATCCCTAGGCTAAAGGATTCTGTCATCTCCAGTGTACAACTGTTTCCTGGTCCCAGAGAACCGGAAGAGGCACAAGGGAGCATGGATATTGTCCCATCAGTCAAATGTGACAATGAAAAGATGATTGTGGCTGTAGAAAAAGATTCTTTTCAGACCAACGGCTACTCAGGGATGGAGCTCACCCTGTTGGATCCTTCCTGCAAGGCCAAGATGAATGGCACGCACTTCATTTTGGAGTCTCCCCTGAATGGCTGTGGAACTCGGCGCCGGCGGCAGTCAGCCTCCCGTGGTGTGGTTTACTATAACTCTATTGTGATACAGGTCCCGTCGCCTGGGGACAGCAGTGGCTGGCCAGATGGTTATGAAGATTTGGAGTCAGGTGATAATGGATTTCCAGGAGATTTGGATGAAGGAGATGTTTCCCTCTCCAGCCGTCCTGAAATTGTGATGTTTAATTGTAGCTTGAGGCAGCTGGGGAATCCCAGCAGCTTCCAGGACCAGCCCAGTGGAAACATCACTTTCAACATGGAGCTGTACAACACTGACCTCTTTCTGGTGCCCTCCCAAGGGGTCTTCTCTGTGGCAGAGAACGGACACATTTACGTTGAGGTGTCTGTCACTAAGGCTGACCAAGAACTAGGATTTGCCATCCAAACGTGCTTTATCTCTCCATCTTCAAACCCTGATAGGATGTCTGATTATACCATCATTGAGAACATTTGTCCTAAAGATGAATCTGTGAAATTCTACAGTCCCAAGAGAGTGCACTTTCCTATCCCACAAGCTGAGATGGATAAGAAGAGATTCAGCTTTGTCTTTAAGTCCATGTTCAACACCTCACTGCTCTTCCTGCAATGTGAGCTGACACTGTGTACCGAGAAGGAGAAGGATCACCAGAAGTTGCCTAAGTGTGTGCCTCCCGACGAAGCCTGTACCTCGCTGGATGCTGCCATGATCTGGGCCATGATGCAGAACAAGAAGACATTTACCAAGCCACTGGCCGTGATCCACCAAGCAGAACCTAAAGAAAAAGTTCCAAGCATGAAGGAATCAAATCCAGTTCCTCCACCAATTTTCCATGGTCTGGACACCCTGACTGTGATGGGCATTGCATTTGCAGCATTTGTGATCGGAGCACTCTTGACAGGAGCCTTGTGGTACATCTATTCCCACACAGGAGAGACAGCAGGAAGGCAACAAGTCCCCACCTCTCCACCGGCCTCAGAAAACAGCAGTGCAGCTCACAGCATCGGAAGCACACAGAGTACGCCCTGCTCCAGCAGCAGCACAGCCTAG

Related Sequences

XP_004841341.1 Protein

Tgfbr3 PREDICTED: transforming growth factor beta receptor type 3 isoform X2 [Heterocephalus glaber]

Length: 850 aa      View alignments
>XP_004841341.1
MTSHYVITVFVLMSSCLATAGPEPSARCELSPVNASHPVQALLETFSVLSGCASRGTTRLPQEVHVLNLCTAEKGPGQPQKEVTLHLKPISSVYIHHKPVVFLLNSLQPLVWHLKTERLATGVPRLFLVSEGSVVQFSSGNFSLTAKTEERNLPHGNEHLLNWAQKEYGAVTSFTELKIAKNIYIKVGEDQVFPPTCNIGKNFLSLNYLAGYLQPKAAEGCVMSSQPRDEEVHIIEIITPNSNPYSDFQVDIIIDIRPSPEDSTVVKNLILILKCKKFVNWVIRSFDVKGNLKVIAPNSIGFGKENERSMTMTRSIRNDIPSTQENLVKWALDNGYSPVTSYTLAPVANRFHVRVENNEEMRDEEVHTIPPGLQILLDPVILPGPENPPFQGGGSRTGGLPFPFPDISRRGRKEGGEDRIPRLKDSVISSVQLFPGPREPEEAQGSMDIVPSVKCDNEKMIVAVEKDSFQTNGYSGMELTLLDPSCKAKMNGTHFILESPLNGCGTRRRRQSASRGVVYYNSIVIQVPSPGDSSGWPDGYEDLESGDNGFPGDLDEGDVSLSSRPEIVMFNCSLRQLGNPSSFQDQPSGNITFNMELYNTDLFLVPSQGVFSVAENGHIYVEVSVTKADQELGFAIQTCFISPSSNPDRMSDYTIIENICPKDESVKFYSPKRVHFPIPQAEMDKKRFSFVFKSMFNTSLLFLQCELTLCTEKEKDHQKLPKCVPPDEACTSLDAAMIWAMMQNKKTFTKPLAVIHQAEPKEKVPSMKESNPVPPPIFHGLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGSTQSTPCSSSSTA