Details from NCBI annotation

Gene Symbol Chrna4
Gene Name cholinergic receptor, nicotinic, alpha 4 (neuronal), transcript variant X2
Entrez Gene ID 101714448

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHRNA4 ENSCPOG00000010559 (Guinea pig)

Gene Details

cholinergic receptor, nicotinic, alpha 4 (neuronal)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009479, Guinea pig)

Protein Percentage 88.22%
CDS Percentage 88.95%
Ka/Ks Ratio 0.08781 (Ka = 0.0555, Ks = 0.6316)

CHRNA4 ENSG00000101204 (Human)

Gene Details

cholinergic receptor, nicotinic, alpha 4 (neuronal)

External Links

Gene Match (Ensembl Protein ID: ENSP00000359285, Human)

Protein Percentage 86.04%
CDS Percentage 86.58%
Ka/Ks Ratio 0.08655 (Ka = 0.0758, Ks = 0.8755)

Chrna4 ENSMUSG00000027577 (Mouse)

Gene Details

cholinergic receptor, nicotinic, alpha polypeptide 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066338, Mouse)

Protein Percentage 82.98%
CDS Percentage 82.82%
Ka/Ks Ratio 0.0762 (Ka = 0.0918, Ks = 1.2042)

Chrna4 ENSRNOG00000011202 (Rat)

Gene Details

cholinergic receptor, nicotinic, alpha 4 (neuronal) (Chrna4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009041, Rat)

Protein Percentage 83.47%
CDS Percentage 83.14%
Ka/Ks Ratio 0.07748 (Ka = 0.0901, Ks = 1.1623)

Genome Location

Sequence Coding sequence

Length: 1857 bp    Location: 29039605..29024668   Strand: -
>XM_004841050.1
ATGGAGCTCGGGGTCCCCGGAGCACCGCCCCCGCTGCTGCCTGGGCTGCTGCTGCTCCTGGGGACCGGCCTCCTGCCGGTGAGCAGCCATGTGGAGACCCGGGCCCACTCGGAGGAGCGGCTCTTGAAGACCCTCTTCTCCGGCTACAACAAGTGGTCCCGGCCAGTGGCCAACACCTCGGATGTGGTCCTCGTCCGCTTTGGCCTGTCCATCGCCCAGCTAATTGATGTGGACGAGAAGAACCAGATGATGACGACGAACGTGTGGGTGAAGCAGGAGTGGCACGACTACAAGCTGCGCTGGGAGCCCAGCGACTACGAGAACGTCACCTCTATCCGCATTCCCTCTGAGCTCATCTGGCGGCCGGACATCGTCCTCTATAACAATGCGGATGGGGACTTTGCCATCACCCACCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGACGCCCCCGGCCATCTACAAGAGCTCCTGCAGCATCGATGTCACCTTCTTCCCCTTCGACCAGCAGAACTGCACCATGAAGTTCGGGTCCTGGACCTACGACAAGGCTGAGATCGACCTGGTGAGCATGCACAGCCGGGTGGACCAGCTGGAGTTCTGGGAGAGCGGCGAGTGGGCCATCGTGGATGCCGTGGGCACCTACAACACGCGGAAGTATGAGTGCTGTGCCGAGATCTATCCCGACATCACCTACGCCTTCGTCATCCGGCGCCTGCCACTCTTCTACACCATCAACCTCATCATCCCGTGCCTGCTCATCTCCTGCCTCACCGTGCTGGTCTTCTACCTCCCCTCCGACTGCGGCGAGAAGATCACCCTGTGCATCTCGGTGCTGCTGTCGCTCACCGTCTTCCTGCTCCTCATCACCGAGATCATCCCGTCCACCTCACTGGTCATCCCGCTCATCGGTGAGTACCTGCTCTTCACCATGATCTTCGTCACCCTCTCCATCATCATCACCGTCTTCGTGCTCAACGTGCACCACCGCTGGCCGCACACGCACAGCATGCCTGCCTGGGTGCGCAGGGTTTTCCTGGACATCGTGCCGCGCCTGCTCTTCATGAAGCGGCCGTCCGTGGTCAAGGACAACTGCCGGCGGCTCATCGAGTCCATGCACAAGATGGCCAGCACCCCACGCTTCTGGCCCGAGCCTGAGGGGGAGCCCAGCGTCCTGAGTGGCTCCCGCAGTGGGGGCCCATCTCCCAGCCCATCCTCCTGTGTCCCTGCGGAGCCTCAGCCTTCCTGCAAGTCGGCCTCTGGCCAGGCGCCCACTGTGGAGCCCGCGGGGGCCGAGGAGGCTGGCCCCTGCCCCCTACCCAACAGCTCCAGGGCCTTTGCGACCCCCAAAGCCAGGTCCCTGAGTGTCCAGCACATGTCCAGTCCCCATGAAACAACGGAGGGCGGCATCCGGAGCCGATCTCGGAGTGTCCAGTACTGGGGCCCTCGGGACAGCACTGCCTCCTGGGCTGATGGCTGGGTGGCTGGCTCCCCGGCTTCTCTGAAGGCCCAGTCTGCTGAGCTGCCGCCAGACCAGCCCTCCCCATGCAAGTGCATGTGTAAGAAGGAGCCACCTGTGGTGTCCCCGGTCACTGTGCTCGAGGCCCACAGCACCAAAGTGCCACCCCGGCACCTGCCCCTGTCACCGGCCTTGACCCAGGCGGTGGAGGGCGTCCAGTACATCGCTGATCATCTGAAGGCAGAAGACTCTGATTTCTCGGTGAAGGAGGACTGGAAGTACGTGGCCATGGTCATCGACCGCATCTTCCTCTGGATGTTCATCGTTGTCTGCCTGCTGGGAACCGTGGGCCTGTTCCTGCCACCCTGGCTGGCCGGCATGATCTAA

Related Sequences

XP_004841107.1 Protein

Chrna4 PREDICTED: neuronal acetylcholine receptor subunit alpha-4 isoform X2 [Heterocephalus glaber]

Length: 618 aa      View alignments
>XP_004841107.1
MELGVPGAPPPLLPGLLLLLGTGLLPVSSHVETRAHSEERLLKTLFSGYNKWSRPVANTSDVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWEPSDYENVTSIRIPSELIWRPDIVLYNNADGDFAITHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAEIDLVSMHSRVDQLEFWESGEWAIVDAVGTYNTRKYECCAEIYPDITYAFVIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIIITVFVLNVHHRWPHTHSMPAWVRRVFLDIVPRLLFMKRPSVVKDNCRRLIESMHKMASTPRFWPEPEGEPSVLSGSRSGGPSPSPSSCVPAEPQPSCKSASGQAPTVEPAGAEEAGPCPLPNSSRAFATPKARSLSVQHMSSPHETTEGGIRSRSRSVQYWGPRDSTASWADGWVAGSPASLKAQSAELPPDQPSPCKCMCKKEPPVVSPVTVLEAHSTKVPPRHLPLSPALTQAVEGVQYIADHLKAEDSDFSVKEDWKYVAMVIDRIFLWMFIVVCLLGTVGLFLPPWLAGMI