Sequence details NCBI ID: XM_004840911.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gzf1
Gene Name GDNF-inducible zinc finger protein 1, transcript variant X1
Entrez Gene ID 101702264

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GZF1 ENSCPOG00000010790 (Guinea pig)

Gene Details

GDNF-inducible zinc finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009687, Guinea pig)

Protein Percentage 85.55%
CDS Percentage 84.57%
Ka/Ks Ratio 0.15478 (Ka = 0.0878, Ks = 0.5674)

GZF1 ENSG00000125812 (Human)

Gene Details

GDNF-inducible zinc finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000338290, Human)

Protein Percentage 79.44%
CDS Percentage 81.5%
Ka/Ks Ratio 0.15752 (Ka = 0.1132, Ks = 0.7183)

Gzf1 ENSMUSG00000027439 (Mouse)

Gene Details

GDNF-inducible zinc finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028928, Mouse)

Protein Percentage 78.16%
CDS Percentage 78.44%
Ka/Ks Ratio 0.13403 (Ka = 0.1292, Ks = 0.9638)

Gzf1 ENSRNOG00000004735 (Rat)

Gene Details

GDNF-inducible zinc finger protein 1 (Gzf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006287, Rat)

Protein Percentage 77.73%
CDS Percentage 77.97%
Ka/Ks Ratio 0.13699 (Ka = 0.133, Ks = 0.9711)

Genome Location

Sequence Coding sequence

Length: 2199 bp    Location: 23035660..23045322   Strand: +
Raw sequence   
>XM_004840911.1
ATGGAAAGTGGCACGGTTCTGCTGGAATCCAAATCCTCCCCATTTCACCTGCTTCGGGAAATGCACAAGCTCCGCCTTCTTGGCCACCTGTGTGACGTCACCATCAGCGTGGAGTACCAGGGTGTACGAGAAGACTTCATGGCCCACAAAGCGGTGCTGGCAGCCACCAGCAAGTTTTTTAAGGATATGTTCCTGAATGAGAAGAGTATGGATGGGACCAGGACTAACGTGTACTTACATGAGGTGCAGGTGGTCGACTTTGCTTCGTTTCTTGAGTTTGTCTACACTGCCAAGGTTCAGGTGGAGGAAGACCGGGTGGAGCGGATGCTGGAGATGGCAGAAAAGCTCAAGTGTTTGGACCTGTCGGAAACTTGTTTCCAATTAAAGAAGCAGATGTTAGAGTCGGTCCTTTTGGAATTGCAGAATTTCTCGGAGTCTCAGAAGGCTGAAGCCAACAGTGGCCCCCTGGCCAATGTTGCTGTAGACTCTAGAGCAAGTGTGGCCGGGGATAGTGCCCATTGCAACGGTCTTCTGGGCTCCTCAGATCACTCAGAGGACGGGCTCAGCAATGGCTTGTCACCAGATATGCCAGCGAGGAAGCCCAAGGAAAAGCTAGACAAGAAGAGAGATGTGGCCAAACCTCCCTACCCTAAAATCAGAAGAGCGAGTGGAAGGCTGGCTGGGAGAAAGGTGTTTGTGGAAATCCCTAAAAAGAAATACACAAGACGACTCCGAGAGCAGCAGAAGAGTGCCGAGGACGCAGTTGTGGGGGATTGTGTGTGTCCCCAGGAGCAGCCTGAAGGCAGTGTGGTCACAGAGACGGAGGCAGCTGCAGAGACAAAGCTGGATGCCGAGATGATCCCGTCCACAGATATGGCACCTGCTGCAGCAGGGAGCCAGGGATGTGGTGCGGGGGAGCTGGAGGGAGCACTACAGAGGGAAAGGGCAGCAGGGCCTGGGAAGGAGGCTGAGGGCGATGGCGACGACGGCGAGGAGGGCAGAAAGAAGAGTAACTTGAAGTGTACGCTCTGCGACAAGGCCTTCTTGTATGAGAAGAGCTTCCTGAAGCACGTCCAGCAGCACCATGGTGTGGCCACCGAGGCGGTGTACCGCTGCGACACCTGCGGCCAGACCTTCGCCAACCGCTGCAACCTCCGGAATCACCAGCTCCTCGTGCACAGCAGCGAGCGCCACTTCCCCTGTGAGCTGTGCGGGAAGAAGTTCAAGCGCCAGAAGGACGTGCGGCGGCACGTGCTGCATGTGCACGAGGGCGGAGGTGCACGCCACCGATGTGCAGAGTGTGGCAAGGGCCTAAGCTCAAAGACGGCCCTGCGCCTGCACGAGCGCACGCACACAGGAGATCGGCCGCATGTTTGCCCTGACTGCGGCGCGCGCTTCTCACAACCCTCAGCGCTCAAGACCCACATGAGAATTCATACAGGGGAAAAGCCTTTTGTCTGTGATGAGTGTGGGGCGAGATTCACTCAGAACCACATGCTGATTTACCACAAAAGGGTCCACACAGGTGAAAAGCCTTTTATGTGTGAAACATGTGGCAAGAGTTTTGCTTCCAAGGAGTACTTAAAGCACCACAACAGAATCCATACTGGCTCCAAACCTTATAAGTGTGAAATGTGTTTCAGGACTTTTGCCCAGCGGAACTCACTCTACCAGCACGTGAAAGTCCACACAGGGGAGCGGCCCTACTGTTGTGACCAGTGCGGGAAGCAGTTCACCCAGCTCAATGCCCTCCAGCGCCACCGTCGCATCCACACAGGAGAGAAGCCGTTCATGTGTAACGCGTGTGGACGAACATTCACTGACAAGTCCACCCTCCGGCGGCACACCTCAATCCACGATAAGAATACTCCATGGAAGTCTTTCCTTGTTATTGTAGATGGCTCACCGAAGAACGACGAAGAGCATAAGACAGAGCAGCCCGATGAAGAGTATGCACCCCCCAAACTTCCGCAGAAGTTGCTGCCCTTCGCAGAAAATGGCCACTTTGACAGCCTGGCCACTGCGCCAGGTATGGCACCTGCCAGACAAAACAATGCCACACATGCAGACTGTAAGGCGGATGCTTCCGTGGTGTCCCAGGATACTCTGCTTGCCACTGCCATGAGTGAGCTCGGTGAGCTGACCCCACAGACAGACTCGATGCCCACACAGCTTCACTCTCTGAGCAGCATTGAATGA

Related Sequences

XP_004840968.1 Protein

Gzf1 PREDICTED: GDNF-inducible zinc finger protein 1 isoform X1 [Heterocephalus glaber]

Length: 732 aa      View alignments
>XP_004840968.1
MESGTVLLESKSSPFHLLREMHKLRLLGHLCDVTISVEYQGVREDFMAHKAVLAATSKFFKDMFLNEKSMDGTRTNVYLHEVQVVDFASFLEFVYTAKVQVEEDRVERMLEMAEKLKCLDLSETCFQLKKQMLESVLLELQNFSESQKAEANSGPLANVAVDSRASVAGDSAHCNGLLGSSDHSEDGLSNGLSPDMPARKPKEKLDKKRDVAKPPYPKIRRASGRLAGRKVFVEIPKKKYTRRLREQQKSAEDAVVGDCVCPQEQPEGSVVTETEAAAETKLDAEMIPSTDMAPAAAGSQGCGAGELEGALQRERAAGPGKEAEGDGDDGEEGRKKSNLKCTLCDKAFLYEKSFLKHVQQHHGVATEAVYRCDTCGQTFANRCNLRNHQLLVHSSERHFPCELCGKKFKRQKDVRRHVLHVHEGGGARHRCAECGKGLSSKTALRLHERTHTGDRPHVCPDCGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIYHKRVHTGEKPFMCETCGKSFASKEYLKHHNRIHTGSKPYKCEMCFRTFAQRNSLYQHVKVHTGERPYCCDQCGKQFTQLNALQRHRRIHTGEKPFMCNACGRTFTDKSTLRRHTSIHDKNTPWKSFLVIVDGSPKNDEEHKTEQPDEEYAPPKLPQKLLPFAENGHFDSLATAPGMAPARQNNATHADCKADASVVSQDTLLATAMSELGELTPQTDSMPTQLHSLSSIE