Details from NCBI annotation

Gene Symbol Ap5s1
Gene Name adaptor-related protein complex 5, sigma 1 subunit, transcript variant X4
Entrez Gene ID 101702372

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AP5S1 ENSCPOG00000012317 (Guinea pig)

Gene Details

adaptor-related protein complex 5, sigma 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011080, Guinea pig)

Protein Percentage 90.0%
CDS Percentage 88.17%
Ka/Ks Ratio 0.13701 (Ka = 0.0552, Ks = 0.4032)

AP5S1 ENSG00000125843 (Human)

Gene Details

adaptor-related protein complex 5, sigma 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000246041, Human)

Protein Percentage 84.0%
CDS Percentage 83.17%
Ka/Ks Ratio 0.11122 (Ka = 0.0857, Ks = 0.7701)

Ap5s1 ENSMUSG00000068264 (Mouse)

Gene Details

adaptor-related protein 5 complex, sigma 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000086933, Mouse)

Protein Percentage 69.0%
CDS Percentage 70.83%
Ka/Ks Ratio 0.23664 (Ka = 0.2578, Ks = 1.0893)

Ap5s1 ENSRNOG00000021249 (Rat)

Gene Details

adaptor-related protein complex 5, sigma 1 subunit (Ap5s1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031548, Rat)

Protein Percentage 77.51%
CDS Percentage 76.73%
Ka/Ks Ratio 0.1782 (Ka = 0.1594, Ks = 0.8946)

Genome Location

Sequence Coding sequence

Length: 603 bp    Location: 4903851..4907702   Strand: +
>XM_004840745.1
ATGGTCCACGCCTTTCTCATACATACTTTGAGGACCCCGAATGCAGAGGCCACAGGCTTTTGCCGAGTGCTCTACTCTTGCGTCTTTGGTGCTGAGAAGTCACCAGATGATCCAAGGCCACACGGTGCAGAGAGGGACAGGCTCCTCCGAAAGGAACAGATTTTGGCAGTGGCCAGGCAGGTGGAGTCGATGTGTCAACTGCAGCAGCTGGCATCAGGCCGCCCATCCTTGGACCTGCAGACCCAGATCTGTGACGAGCCTGTGCCCCTGCATGAGTCCCCACATGGGGTCTTCGGGCTGGCGGCAGGAGACCCCTTCCGGGAGCCTCACACCGTGGTGTGGTTGGGAGTGCTGTCCCTAGGCTTTGCCCTGGTGCTCGACGCCCATGACAACCTGCTGCTGGCAGAGAGCACACTCCGCCTGCTGGCCCGCCTCCTCCTGGACCACCTCCGTCTGCTGACCCCAGGCTCCAGCCTCCTGCTGCGGGCCGACCATGTTGAGGGCGTCCTCTCCCGCTTCCTGCCCCATGGCCAGCTGCTCTTCCTCAATGACCAGTTCGTCCAGGCTCTGGAGAAGGAATTCAGTGCTTCCTGGCCCCGCTGA

Related Sequences

XP_004840802.1 Protein

Ap5s1 PREDICTED: AP-5 complex subunit sigma-1 isoform X4 [Heterocephalus glaber]

Length: 200 aa      View alignments
>XP_004840802.1
MVHAFLIHTLRTPNAEATGFCRVLYSCVFGAEKSPDDPRPHGAERDRLLRKEQILAVARQVESMCQLQQLASGRPSLDLQTQICDEPVPLHESPHGVFGLAAGDPFREPHTVVWLGVLSLGFALVLDAHDNLLLAESTLRLLARLLLDHLRLLTPGSSLLLRADHVEGVLSRFLPHGQLLFLNDQFVQALEKEFSASWPR