Sequence details NCBI ID: XM_004840659.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nsfl1c
Gene Name NSFL1 (p97) cofactor (p47), transcript variant X2
Entrez Gene ID 101704155

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NSFL1C ENSCPOG00000004012 (Guinea pig)

Gene Details

NSFL1 (p97) cofactor (p47)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003619, Guinea pig)

Protein Percentage 98.92%
CDS Percentage 95.5%
Ka/Ks Ratio 0.0322 (Ka = 0.0052, Ks = 0.1625)

NSFL1C ENSG00000088833 (Human)

Gene Details

NSFL1 (p97) cofactor (p47)

External Links

Gene Match (Ensembl Protein ID: ENSP00000418529, Human)

Protein Percentage 98.38%
CDS Percentage 93.15%
Ka/Ks Ratio 0.03039 (Ka = 0.008, Ks = 0.2625)

Nsfl1c ENSMUSG00000027455 (Mouse)

Gene Details

NSFL1 (p97) cofactor (p47)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000086542, Mouse)

Protein Percentage 96.76%
CDS Percentage 90.36%
Ka/Ks Ratio 0.03776 (Ka = 0.0155, Ks = 0.4109)

Genome Location

Sequence Coding sequence

Length: 1113 bp    Location: 2774031..2749501   Strand: -
Raw sequence   
>XM_004840659.1
ATGGCGGCGGAACGACAGGATGCGCTGAGGGAGTTTGTGGCGGTAACGGGCGCTGAGGAGGACCGGGCCCGCTTCTTCCTCGAGTCGGCCGGCTGGGACCTGCAGATTGCGCTAGCGAGCTTTTATGAGGACGGAGGGGACGAAGACATTGTGACCATTTCACAGGCAACCCCCAGTTCAGTGTCCAGAGGCACAGCCCCCAGTGATAATAGGGTGACATCCTTCAGAGACCTTATTCATGACCAAGATGAGGATGACGAAGAGGAAGAGGGCCAGAGGTTTTATGCTGGGGGCTCAGAGAGAAGTGGACAACAGATTGTTGGCCCTCCCAGGAAGAAAAGTCCCAACGAGCTGGTGGATGATCTCTTTAAAGGTGCTAAGGAGCACGGAGCTGTAGCTGTGGAGCGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCAAGACCCTTTGCAGGAGGTGGCTACCGTCTTGGAGCAGCACCAGAGGAAGAGTCTGCCTATGTGGCAGGAGAAAGGAGACAGCATTCCAGCCAGGATGTTCATGTCGTTCTGAAGCTCTGGAAAAGTGGATTCAGCCTGGACAATGGCGAGCTCAGAAGCTACCAAGACCCATCCAATGCCCAGTTTCTGGAGTCAATCCGCAGAGGGGAGGTGCCAGCAGAGCTGCGGAGGTTAGCTCATGGTGGGCAGGTGAACTTGGATATGGAAGACCATCGGGATGAGGACTTTGTGAAGCCTAAGGGAGCTTTCAAAGCTTTCACTGGTGAAGGCCAGAAACTCGGCAGCACAGCCCCCCAGGTATTGAGTACCAGCTCTCCAGCCCAGCAGGCAGAAAATGAAGCCAAAGCCAGCTCTTCTGTCTTAATCAACGAGTCAGAGCCTACTACCAACATCCAAATTCGACTTGCCGATGGTGGGAGACTGGTACAGAAATTTAACCACAGCCACAGGATCAGCGACATCCGACTTTTCATCGTGGATGCCCGGCCAGCCATGGCTGCCACCAGCTTTGTCCTCATGACTACCTTTCCAAACAAAGAGCTGGCTGACGAGAGCCAAACTCTGAAGGAAGCCAACCTACTCAATGCTGTCATCGTGCAGCGGTTAACATAA

Related Sequences

XP_004840716.1 Protein

Nsfl1c PREDICTED: NSFL1 cofactor p47 isoform X2 [Heterocephalus glaber]

Length: 370 aa      
>XP_004840716.1
MAAERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDDEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGERRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSVLINESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADESQTLKEANLLNAVIVQRLT