Sequence details NCBI ID: XM_004839395.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Epas1
Gene Name endothelial PAS domain protein 1, transcript variant X2
Entrez Gene ID 101701434

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EPAS1 ENSCPOG00000014242 (Guinea pig)

Gene Details

endothelial PAS domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012832, Guinea pig)

Protein Percentage 90.21%
CDS Percentage 89.5%
Ka/Ks Ratio 0.14014 (Ka = 0.0543, Ks = 0.3877)

EPAS1 ENSG00000116016 (Human)

Gene Details

endothelial PAS domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000263734, Human)

Protein Percentage 88.84%
CDS Percentage 87.61%
Ka/Ks Ratio 0.09915 (Ka = 0.0546, Ks = 0.551)

Epas1 ENSMUSG00000024140 (Mouse)

Gene Details

endothelial PAS domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024954, Mouse)

Protein Percentage 86.54%
CDS Percentage 84.81%
Ka/Ks Ratio 0.0944 (Ka = 0.0693, Ks = 0.7338)

Epas1 ENSRNOG00000021318 (Rat)

Gene Details

endothelial PAS domain protein 1 (Epas1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033874, Rat)

Protein Percentage 86.31%
CDS Percentage 84.85%
Ka/Ks Ratio 0.1 (Ka = 0.0716, Ks = 0.716)

Genome Location

Sequence Coding sequence

Length: 2613 bp    Location: 27747798..27831211   Strand: +
Raw sequence   
>XM_004839395.1
ATGACAGCTGACAAGGAGAAGAAGAGGAGCAGCTCCGAGAGGAGGAAGGAGAAGTCCCGAGATGCAGCAAGGTGCCGGCGCAGCAAGGAGACAGAGGTCTTCTATGAACTGGCTCATGAGCTGCCCCTGCCACACAGCGTGAGCTCGCACCTGGACAAGGCCTCCATCATGCGGCTGGCCATCAGCTTCCTGCGGACACACAAGCTCCTGTCCTCAGTTTGCTCTGAGAACGAATCTGAAGTGGAGGCTGACCAGCAGATGGATAATTTGTACCTGAAAGCCTTGGAAGGTTTCATTGCTGTGGTGACCCAAGATGGTGACATGATCTTTCTGTCAGAAAACATCAGCAAGTTCATGGGACTCACCCAGGTAGAGCTAACAGGACACAGTATCTTTGACTTCACTCATCCCTGTGACCACGAAGAGATTCGTGAGAACCTGACTCTCAAAAATGGCTCTGGTTTTGGAAAGAAAGTCAAAGAAATGTCCACAGAACGTGACTTCTTCATGAGGATGAAGTGTACGGTCACCAACAGAGGTCGGACTGTCAACCTTAAATCAGCCACCTGGAAGGTCTTGCACTGCACCGGCCAGGTGAAAGTCTACAACAGCTGCCCTCCCCACAGCAGTCTCTGCGGCTATAAGGAGCCTCTGCTCTCCTGCCTCATCATCATGTGTGAGCCGATCCAGCACCCGTCCCACATGGACATCCCCCTCGACAGCAAGACCTTCCTGAGCCGCCACAGCATGGACATGAAGTTCACCTACTGTGATGACAGAATCACAGAGCTGATTGGTTACCACCCTGAAGATCTGCTTGGCCGCTCAGCCTATGAGTTCTACCACGCACTGGACTCAGAGAACATGACCAAGAGTCACCAGAACTTGTGCACCAAAGGCCAGGTTGTGAGTGGCCAGTACCGGATGCTCGCAAAGCATGGGGGCTACGTGTGGCTGGAGACGCAGGGGACTGTCATCTACAACCCTCGCAACCTGCAGCCCCAGTGCATCATGTGCGTCAACTATGTCCTGAGTGAGATTGAGAAGAATGACGTGGTGTTCTCCATGGACCAGACCGAATCCCTGTTCAAGCCCCATGTCATGGCCATGAACAGCATCTTTGACAGCAGTGACGAGAGGGCTGCATCTGAGAAGAGCAACTTCCTGTTCACCAAGCTGAAGGAGGAACCCGAGGAGCTGGCCCAGCTGGCCCCCACTCCAGGGGATGCCATCATCTCTCTGGACTTCGGAAACCAGAACTTCAAGGAGTCTTCAGCCTTTGGCAAGGCCATCCTGCCCCCGGGCCAGCCATGGGCTGCAGAGGTGAGGAGCCACAGTGCCCAGAGCGAGGCTGGAAGCCTGCCTGCCTTCACCGTACCCCAGGTGGCTGCCCCAGGGAGCAGTACCCCCAGTACCACAAGCAGCAGCAGCTGTTCCACGCCCAGCAGCCCCGGAGACTACTACACTTCTCTGGGGGATGACCTGAAGATTGAAGTGATCGAGAAACTCTTTGCCATGGATACAGAGGCAAAGGACCAGTGCAGCACCCAGACGGATTTCAATGAGTTGGACTTGGAGACTCTGGCGCCCTACATCCCCATGGATGGGGAGGACTTCCAGCTGAGCCCCATCTGCCCAGAGGAGCCACACCTGCCTGAGAGCCTGCAGCCCACCCCCCAGCCATGCTTCAGTGCCATGACAAGCATCTTCCAGCCACTGGCCCCCATGGCCTGTCACAGCCCTTTCCTCCTGGACAAGTACCGGCAGCAGCTAGAGGGCAAGAAGACCGAGCCGGACCACCGGCCCATGTCCTCTATCTTCTTCGATGCTGGGAGCAAGGGATCCCTGCCATCGTGCTGTGGCCAGGCCAGCACCCCTCTCTCGTCCATGGGCGGCAGATCCAACACGCAGTGGCCCCCAGACCCGCCGTTACATTTCGGGCCCACAAAGTGGCCTGGTGGGGAGCCACACACCGAGTGCTTGGGGACATCGCCATTGGAGCACCCCATTGCCTCGCCCCATGTCTCCATGTTCAAGATGAGGTCTGCAAAGGGCTGCGGGCCTCGGGGCCCAGACGTGATGAGCCCAGCCATGATAGCCCTCTCCAACAAGCTGAAGCTGAAGCGACAGCTGGAATATGAGGATCGAGCCTTCCAGGACTCGAGTGGGGGGGACTCTCCAGGCAGCAGCAGTTCACACTTGATGTGGAAACGCATAAAGCGTCTCCGGAGCGGGCCTGGCCCTTTGGTGCCTGACAAGCCCTTGAGAAACGTTCACGTCCCCGCAGATGAGTTCAACAAAAACTCCCTGAGGGGCCTGAGCCAGCCCCTACGACACCTGCCACCCCCACAACCACCATCTGCTGTAAGCCCAGCGGAGAATGCCAAGGGTGGGTTCCCCCCACAGTGCTATGCTGCCGCCTACCAGGACTACAGCCTGCCCTCCACTCACACGGTGTCAGGGATAGCAAGCCGGCTGCTTGGGCCCTCATTTGAGCCCTACCTGCTACCCGAACTGACTAGATATGACTGTGAGGTGAACGTTCCTGTGCCAGGAAGCTCCACGCTCCTGCAAGGAGGGGACCTCCTCAGAGCCCTGGATCAAGCTACCTGA

Related Sequences

XP_004839452.1 Protein

Epas1 PREDICTED: endothelial PAS domain-containing protein 1-like isoform X2 [Heterocephalus glaber]

Length: 870 aa      View alignments
>XP_004839452.1
MTADKEKKRSSSERRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCSENESEVEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKVKEMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVKVYNSCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEDLLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTESLFKPHVMAMNSIFDSSDERAASEKSNFLFTKLKEEPEELAQLAPTPGDAIISLDFGNQNFKESSAFGKAILPPGQPWAAEVRSHSAQSEAGSLPAFTVPQVAAPGSSTPSTTSSSSCSTPSSPGDYYTSLGDDLKIEVIEKLFAMDTEAKDQCSTQTDFNELDLETLAPYIPMDGEDFQLSPICPEEPHLPESLQPTPQPCFSAMTSIFQPLAPMACHSPFLLDKYRQQLEGKKTEPDHRPMSSIFFDAGSKGSLPSCCGQASTPLSSMGGRSNTQWPPDPPLHFGPTKWPGGEPHTECLGTSPLEHPIASPHVSMFKMRSAKGCGPRGPDVMSPAMIALSNKLKLKRQLEYEDRAFQDSSGGDSPGSSSSHLMWKRIKRLRSGPGPLVPDKPLRNVHVPADEFNKNSLRGLSQPLRHLPPPQPPSAVSPAENAKGGFPPQCYAAAYQDYSLPSTHTVSGIASRLLGPSFEPYLLPELTRYDCEVNVPVPGSSTLLQGGDLLRALDQAT