Sequence details NCBI ID: XM_004838565.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccnj
Gene Name cyclin J, transcript variant X3
Entrez Gene ID 101716197

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCNJ ENSCPOG00000001476 (Guinea pig)

Gene Details

cyclin J

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001332, Guinea pig)

Protein Percentage 94.54%
CDS Percentage 93.86%
Ka/Ks Ratio 0.22774 (Ka = 0.0348, Ks = 0.153)

CCNJ ENSG00000107443 (Human)

Gene Details

cyclin J

External Links

Gene Match (Ensembl Protein ID: ENSP00000435373, Human)

Protein Percentage 98.11%
CDS Percentage 94.16%
Ka/Ks Ratio 0.05377 (Ka = 0.0106, Ks = 0.1978)

Ccnj ENSMUSG00000025010 (Mouse)

Gene Details

cyclin J

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025983, Mouse)

Protein Percentage 95.64%
CDS Percentage 85.74%
Ka/Ks Ratio 0.03442 (Ka = 0.0235, Ks = 0.6827)

Genome Location

Sequence Coding sequence

Length: 1116 bp    Location: 7431818..7447225   Strand: +
Raw sequence   
>XM_004838565.1
ATGGAGCTGGAGGGGCAGTGGTGGCGAGGACAGCTGGCTGCCGACATCCACCAAGCGCTTCGCTACAAGGAGCTGAAGTTGCCCTCCTACAAAGGCCAGTCCCCTCAACTAAGTCTCAGAAGGTATTTTGCTGACTTGATTGCCATTGTAAGCAATCGCTTCACACTCTGCCCTTCTGCCAGACATCTTGCTGTCTATTTACTGGACTTGTTTATGGATCGCTATGACATCTCTATCCAGCAACTGCATTTAGTTGCACTTTCCTGTCTGCTTTTAGCAAGTAAATTTGAAGAAAAAGAAGACAGTGTGCCTAAGCTGGAGCAGCTCAACAGCCTGGGTTGTATGACTAATATGAATCTAGTGTTAACAAAACAGAATTTGCTACATATGGAACTATTACTATTAGAAACCTTTCAGTGGAACCTCTGCCTTCCAACAGCTGCCCATTTCATTGAGTATTATCTCTCTGAAGCAGTACATGAAACAGATCTTCATGATGGCTGGCCAATGATTTGTTTGGAAAAAACTAAGCTCTACATGGCTAAATATGCAGATTACTTCCTGGAAGTATCTCTACAAGCTGCTGCATGTGTGGCTTCTTCGAGGATTATACTTCGACTTTCTCCAACGTGGCCTACAAGACTACATCGTCTTACTGCTTATTCGTGGGATTTCCTAGTGCAGTGCATTGAACGGCTATTGATTGCTCATGACAATGATGTGAAAGAAGCAAACAAACAGAGAGGACAGGCAGGCCCTCATTCAGCACAAATAGGTGTGTTCCAGACAGCCTCCCAGCCCTCACGGCCAGTTCACTTTCAGCAGCCTCAATATCTCCATCAGACTCAACAGACCTCACTGCAGTACCGCCATCCTGTATCAGAGCAACCCAGCTGCCAGCAGATTGTATCTACCACACACACCTCATCTTACACACTACAGACATGTCCTGCTGGCTTCCAAACTAGTGTTCAGGGCCTTGGGCATGTGCAGACTGGTGTTGGGATGTCCCTGACAATACCAGTAGAAGTTAAGCCCTGTCTGAGTGTTTCTTATAACCGGAGTTATCAGATAAATGAACATTACCCTTGTATTACTCCATGCTTTGAAAGGTGA

Related Sequences

XP_004838622.1 Protein

Ccnj PREDICTED: cyclin-J isoform X3 [Heterocephalus glaber]

Length: 371 aa      
>XP_004838622.1
MELEGQWWRGQLAADIHQALRYKELKLPSYKGQSPQLSLRRYFADLIAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQAAACVASSRIILRLSPTWPTRLHRLTAYSWDFLVQCIERLLIAHDNDVKEANKQRGQAGPHSAQIGVFQTASQPSRPVHFQQPQYLHQTQQTSLQYRHPVSEQPSCQQIVSTTHTSSYTLQTCPAGFQTSVQGLGHVQTGVGMSLTIPVEVKPCLSVSYNRSYQINEHYPCITPCFER