Details from NCBI annotation

Gene Symbol Spatc1
Gene Name spermatogenesis and centriole associated 1, transcript variant X2
Entrez Gene ID 101709209

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPATC1 ENSCPOG00000009880 (Guinea pig)

Gene Details

spermatogenesis and centriole associated 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008864, Guinea pig)

Protein Percentage 85.88%
CDS Percentage 89.34%
Ka/Ks Ratio 0.36269 (Ka = 0.0806, Ks = 0.2224)

SPATC1 ENSG00000186583 (Human)

Gene Details

spermatogenesis and centriole associated 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000366690, Human)

Protein Percentage 74.44%
CDS Percentage 79.0%
Ka/Ks Ratio 0.22731 (Ka = 0.1581, Ks = 0.6955)

Spatc1 ENSMUSG00000049653 (Mouse)

Gene Details

spermatogenesis and centriole associated 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073805, Mouse)

Protein Percentage 72.46%
CDS Percentage 77.26%
Ka/Ks Ratio 0.29143 (Ka = 0.1852, Ks = 0.6355)

Spatc1 ENSRNOG00000029590 (Rat)

Gene Details

spermatogenesis and centriole associated 1 (Spatc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041285, Rat)

Protein Percentage 71.98%
CDS Percentage 77.01%
Ka/Ks Ratio 0.28556 (Ka = 0.1847, Ks = 0.6468)

Genome Location

Sequence Coding sequence

Length: 1428 bp    Location: 12804292..12780166   Strand: -
>XM_004837788.1
ATGTCTCTACTCACCAATTATGAAGGGCTTCGGCATCAAATAGAGAAGCTGGTTCGAGAGAATGAGGAACTAAAGAAGCTGGTGTGGCTCATTCAGGAGAATCAAGAACTCAGGTCTGCGATCAAGACTCAGGCGGGCAGCATTAACATCAGCGGGCTCACCAACGGGCTTGGCAAGGTGGCAACAGGCCCTGCCCAACACCAGGGTGTCTTCTTGTTCCCATCCCCAGCAGCAGCAAATGAACCAGTCTTGGAAGAAGTAGGGGTTGTAGCCCTGGCACCCCTGGTCGACCTGCTGAGCAGTCCACAGCCTAACCCCCTGACGGGCCCTCTCAACATACTGCTGTCCAGCCCAGCACCACCTGGGTCACAGAGCAGTCCATTCTCCAGCCTGCTGAGCGGCACCCTGAGCAGCCACCTGACTGGTCCCAAGGCTGTTTCTCCAGGAGGCACTCTGGTCATGTCTCTGGGCCTGACCTCCACTGGTCCCCTGAGCAGCCCCGTGATGGTCCCCATGGCAGTGTCCCCTGGGGGCACCGTGGCTGGCTCCCTGGGCTTGACCTCCACTGGCTCCCTGACTCCAAGCAGCCCCCTAGCAGGCCCCCTGACTATGTCTAAGAGCAGCCCCCTGATGGCCCCTGGGGCAGGCACAGTTGCCATCTCTCTGAGCAGTCCCCTGCTCACCTCCACAGCTGCCCCTATAGGTGTCTCTCAGAACCTTCCAGCCAACCCCATGAGTAGTCTGGTGCTGTCAGAGGGCCCAAGGGTGCGGCTGGCAGAGCCACTCCAAGGAAGCCCTTCTGGGCCCCCCTCTTCAGCTGGGACAGGGGAAGCAGCCACCTCTAAAGTCACGGATACCCGGGGTTCATGTACCATGGAGGCAAACCGGAAAAGCATCCTGGAGTTGGAGCGGAAGCCGACCCACCGAAAAACTAGCAAATTCCCTGATGGCTCCCGAGAGTCGAAGCAGCTGACCTGGGAGAGGCTAGTGGGGGAGATCGCCTTCCAGCTGGACCGCAGGATCCTGTCCAGCATCTTCCCGGAGCGTGTGCGCCTCTATGGCTTCACCGTCTCCAACATTCCAGAGAAGATCATTCAGGCCTCTCTGAACCCCAATGACCACAAGCTGGACGAGGAGCTGTGCCAGACACTCACACAACGCTATGTGAGCATCATGAACAAGCTGCAGAGTCTGGGCTACAATGGACGGGTGCATCCAGCACTGACAGAACAGCTAGTGAATGCCTATGGCATACTGCGTGAGCGGCCAGAGCTGGCTGCATCTGAGGGTGGCTCCTACACCATAGACTTCCTGCAGCATGTGCTGGTGGAGACCGTGCACCCCAGCATACTCACTGATGCGCTGCTACTGCTCTCCTGCCTCAACCAGCTGGCACATGATGATGGCAAGCCAATGTTCATCTGGTGA

Related Sequences

XP_004837845.1 Protein

Spatc1 PREDICTED: speriolin isoform X2 [Heterocephalus glaber]

Length: 475 aa      View alignments
>XP_004837845.1
MSLLTNYEGLRHQIEKLVRENEELKKLVWLIQENQELRSAIKTQAGSINISGLTNGLGKVATGPAQHQGVFLFPSPAAANEPVLEEVGVVALAPLVDLLSSPQPNPLTGPLNILLSSPAPPGSQSSPFSSLLSGTLSSHLTGPKAVSPGGTLVMSLGLTSTGPLSSPVMVPMAVSPGGTVAGSLGLTSTGSLTPSSPLAGPLTMSKSSPLMAPGAGTVAISLSSPLLTSTAAPIGVSQNLPANPMSSLVLSEGPRVRLAEPLQGSPSGPPSSAGTGEAATSKVTDTRGSCTMEANRKSILELERKPTHRKTSKFPDGSRESKQLTWERLVGEIAFQLDRRILSSIFPERVRLYGFTVSNIPEKIIQASLNPNDHKLDEELCQTLTQRYVSIMNKLQSLGYNGRVHPALTEQLVNAYGILRERPELAASEGGSYTIDFLQHVLVETVHPSILTDALLLLSCLNQLAHDDGKPMFIW