Sequence details NCBI ID: XM_004835840.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Scn3a
Gene Name sodium channel, voltage-gated, type III, alpha subunit
Entrez Gene ID 101716077

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCN3A ENSCPOG00000004367 (Guinea pig)

Gene Details

Nav1.3 sodium channel protein; Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003939, Guinea pig)

Protein Percentage 97.85%
CDS Percentage 94.75%
Ka/Ks Ratio 0.05081 (Ka = 0.0102, Ks = 0.2017)

SCN3A ENSG00000153253 (Human)

Gene Details

sodium channel, voltage-gated, type III, alpha subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000283254, Human)

Protein Percentage 97.15%
CDS Percentage 93.15%
Ka/Ks Ratio 0.0501 (Ka = 0.0137, Ks = 0.2743)

Scn3a ENSMUSG00000057182 (Mouse)

Gene Details

sodium channel, voltage-gated, type III, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000097647, Mouse)

Protein Percentage 96.92%
CDS Percentage 89.11%
Ka/Ks Ratio 0.02722 (Ka = 0.0151, Ks = 0.5563)

Scn3a ENSRNOG00000005007 (Rat)

Gene Details

sodium channel, voltage-gated, type III, alpha (Scn3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006646, Rat)

Protein Percentage 96.77%
CDS Percentage 88.92%
Ka/Ks Ratio 0.03052 (Ka = 0.0174, Ks = 0.569)

Genome Location

Sequence Coding sequence

Length: 6006 bp    Location: 222648..329574   Strand: +
Raw sequence   
>XM_004835840.1
ATGGCACAGGCACTTCTGGTACCCCCAGGACCTGAAAGCTTCCACCTTTTTACTAGAGAATCTCTTGCTGCTATCGAAAAACATGCTGCAGAAGAGAAAGCCAAGAAACCCAAAAAAGAGCAAGACAACGATGATGAGAACAAACCAAAGCCAAACAGTGACTTGGAAGCTGGAAAGAACCTCCCATTTATTTATGGAGACATTCCTCCAGAGATGGTGTCAGAGCCCCTGGAAGACCTGGACCCCTACTATATCAATAAGAAAACTTTTATAGTATTGAATAAAGGGAAGGCAATTTTCCGATTCAGTGCCACCTCTGCCTTGTATATTTTAACTCCACTAAACCCCATTAGGAAAGTTGCTATTAAGATTTTGGTACACTCTTTATTCAGCATGCTTATCATGTGCACTATTTTGACCAACTGTGTATTTATGACCTTGAGTAACCCTCCAGATTGGACAAAGAACGTAGAATACACATTCACTGGAATTTATACCTTTGAATCACTTATAAAAATCTTGGCAAGAGGATTTTGCTTAGAAGATTTTACATTCCTTCGTGATCCATGGAACTGGCTAGATTTCAGTGTCATTGTGATGGCATATGTGACAGAGTTTGTGGACCTGGGCAATGTCTCAGCGTTGAGAACATTCAGAGTTCTCCGAGCACTGAAAACTATTTCAGTCATTCCAGGTTTAAAGACCATTGTGGGGGCGCTGATCCAGTCAGTGAAGAAGCTGTCTGATGTCATGATCCTGACTGTGTTCTGTCTGAGCGTGTTTGCACTAATAGGGCTGCAGCTGTTCATGGGCAACCTGCGGAATAAATGTTTGCAATGGCCCCCAAGCAATTCTGCTTTTGAAACCAACACCACTACCTATTTTAATGGCACAATGGATTCAAATGGAACATTTATTAATATAACAATGAGTACATTTAATTGGAAAGACTACATTGGAGATGACAATCACTTTTACGTTTTGGATGGACAAAAAGACCCTTTACTCTGTGGAAATGGCTCAGATGCAGGCCAGTGTCCAGAAGGATACATCTGTGTGAAGGCTGGTCGAAATCCCAACTATGGCTACACAAGCTTTGACACCTTTAGCTGGGCTTTTTTATCTCTATTTCGACTCATGACTCAAGACTACTGGGAGAATCTTTACCAGTTGACATTACGTGCTGCGGGGAAAACCTACATGATATTTTTTGTCCTAGTCATTTTCTTGGGCTCTTTTTACCTGGTGAATTTGATCTTGGCTGTAGTGGCCATGGCCTATGAGGAACAGAATCAGGCCACCTTGGAAGAGGCTGAACAGAAAGAGGCAGAATTTCAGCAGATGCTTGAACAGCTTAAAAAGCAACAGGAAGAAGCTCAGGCAGTCGCGGCGGCATCTGCTGCTTCAAGAGATTTCAGTGGGATAGGTGGGTTAGGAGAGCTCTTGGAAAGTTCTTCAGAAGCATCAAAGTTAAGCTCCAAAAGTGCCAAGGAGTGGAGGAATCGAAGAAAGAAAAGAAGACAGAGGGACCATCCTGAAGGAAGAAACAGCAGAGGCGAGGGAGACAGGTTTCCCAAGTCAGAATCGGAAGACAGTGTCAAAAGAAGAAGCTTCCTTTTCTCCATGGACGGAAACCGGCTGACTGGTGACAAGAAGTTCTGCTCCCCTCATCAGTCTCTGTTGAGTATCCGAGGCTCCCTGTTTTCCCCAAGACGCAATAGCAAAACGAGCATTTTTAGCTTCAGAGGACGGGCCAAGGATGTTGGATCTGAAAATGACTTTGCCGATGATGAGCACAGCACCTTTGAAGACAGCGAGAGCAGGAGAGACTCACTGTTTGTGCCTCCCAGACACGGAGAGCGACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGCTTCCAGCAAATGGGAAGATGCACAGCACTGTGGATTGCAATGGTGTGGTTTCCTTGGTGGGTGGACCTTCAGCTCTAACGTCACCTACTGGACCACTTCAACCAGAGGGCACCACTACTGAAACAGAAGTCAGAAAAAGAAGGCTAAGTTCTTACCAGATTTCAATGGAAATGCTAGAGGATTCCTCTGGAAGGCAAAGAGCCATGAGCATAGCCAGCATCCTGACCAACACAATGGAGGAACTTGAAGAATCTAGACAGAAATGTCCACCATGCTGGTATAGATTTGCCAATATGTTCTTAATCTGGGATTGCTGTGATGCATGGTTAAAAGTAAAGCATCTTGTGAATTTAATTGTTATGGATCCATTTGTTGATCTTGCCATCACTATTTGCATTGTCTTAAATACTCTCTTCATGGCCATGGAACACTATCCCATGACTGATCAATTCAGTAGTGTGTTGACTGTAGGAAACCTGGTCTTCACTGGGATCTTCACAGCAGAAATGGTTCTCAAGATTATTGCTATGGACCCCTATTATTATTTCCAAGAGGGATGGAATATCTTTGATGGAATTATTGTCAGCCTGAGTTTAATGGAACTTGGTCTGGCAAATGTGGAGGGATTATCTGTGCTACGATCATTCAGACTGCTCCGAGTGTTCAAGTTGGCAAAATCCTGGCCAACACTGAACATGCTGATAAAGATCATCGGCAATTCCGTGGGGGCTCTGGGTAACCTCACCTTGGTGTTGGCCATCATTGTCTTCATCTTTGCTGTGGTCGGCATGCAGCTCTTTGGCAAGAGCTACAAAGAATGTGTCTGCAAGATCAACAAGGACTGTAAACTCCCACGCTGGCACATGCATGACTTCTTCCACTCCTTCCTGATCGTGTTCCGCGTGCTGTGTGGAGAGTGGATAGAGACCATGTGGGACTGCATGGAGGTCGCTGGTCAGGCCATGTGCCTTATTGTTTTCATGTTGGTCATGGTCATTGGAAACCTTGTGGTTCTGAACCTCTTTCTGGCCTTATTGTTGAGTTCATTTAGCTCAGACAACCTTGCTGCTACAGATGATGACAATGAAATGAACAATCTCCAAATTGCTATAGGAAGGATGCAAAAAGGAATTGATTATGTGAAAAATAAAATACGGGAATGTTTCCAAAAGGCCTTTTTTAGAAAGCCAAAAGTTCTAGAAATTCATGAAGGCAACAAAATAGACAGCTGCATGTCCAATAACACTGGAATTGAAATAAGTAAAGAGCTTAATTACCTGAAAGATGGGAATGGAACCACCAGTGGTGTGGGTACTGGAAGCAGTGTTGAAAAATATGTAATAGATGAAAATGATTATATGTCATTCATAAACAATCCCAGTCTAACTGTAACAGTGCCAATTGCCATGGGAGAGTCTGACTTTGAAAACTTAAATACTGAAGAGTTCAGCAGTGAGTCAGAACTAGAAGAAAGCAAAGAGAAATTGAATGCAACCAGCTCATCTGAAGGAAGCACAGTTGATGTCGCTCCACCCCGGGAAGGTGAACAAGCTGAAATTGAACCCGAGGAAGACCTTAAGCCAGAAGCTTGTTTCACTGAAGGATGTATTAAAAAGTTCCCATTTTGTCAAGTAAGTACAGAAGAAGGCAAAGGAAAAATCTGGTGGAATCTTCGGAAAACCTGCTACAGCATTGTTGAGCACAACTGGTTTGAGACTTTCATTGTCTTCATGATACTTCTCAGTAGCGGTGCTTTGGCTTTTGAAGACATATACATCGAACAGAGAAAGACAATCAAAACCATGCTAGAATATGCTGACAAGGTCTTCACTTACATATTCATTCTGGAAATGCTTCTCAAATGGGTAGCTTATGGATTTCAAACATATTTCACTAATGCCTGGTGCTGGCTAGATTTCTTGATTGTTGATGTTTCTTTGGTTAGCTTGGTAGCCAATGCTCTTGGCTACTCAGAACTTGGTGCCATCAAATCCCTACGGACACTACGAGCTTTAAGACCTTTAAGAGCCTTATCCCGGTTTGAAGGCATGAGGGTGGTAGTGAATGCCCTAGTTGGAGCAATTCCCTCCATCATGAACGTGCTGTTGGTTTGTCTCATCTTCTGGTTGATCTTTAGCATTATGGGTGTGAATCTGTTTGCTGGCAAGTTCTATCACTGTGTTAACATGACAACTGGTAACAAGTTTGAAGTTAGTGATGTCAACAATTTGAGCGATTGTCAGGCCCTTGGCAAGCAAGCTCGGTGGAAAAATGTGAAAGTAAACTTTGATAATGTTGGTGCTGGCTATCTTGCATTGCTTCAAGTGGCCACATTTAAAGGTTGGATGGATATTATGTATGCAGCTGTTGATTCACGAGATGTTAAACTCCAGCCTATGTATGAAGAAAATCTATATATGTACTTATACTTTGTCATCTTTATCATCTTTGGATCATTCTTCACTCTGAATCTGTTCATTGGTGTCATCATAGATAACTTCAACCAGCAGAAAAAGAAGTTTGGAGGTCAAGATATTTTTATGACAGAAGAACAGAAAAAGTATTACAATGCAATGAAGAAACTTGGATCCAAGAAACCTCAGAAACCTATACCTAGGCCTTCAAATAAATTTCAAGGAATGGTCTTTGATTTTGTAACCAGACAAGTCTTTGATATCAGCATTATGATCCTTATCTGCCTCAACATGGTCACCATGATGGTAGAAACAGATGACCAGAGCAAATATATGACCCTAGTTTTGTCTCGGATCAACCTTGTGTTCATTGTCCTGTTCACTGGAGAGTTTGTGCTGAAGCTCATCTCACTCAGATACTACTACTTCACAATAGGCTGGAACATCTTTGATTTTGTGGTGGTGATTCTCTCCATTGTGGGAATGTTTCTCGCGGAGCTGATAGAGAAGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATACGTCTGGCCAGGATTGGCCGAATCCTTCGTCTGATCAAAGGAGCAAAGGGGATCCGCACACTGCTCTTTGCTTTGATGATGTCTCTTCCTGCCTTGTTTAACATCGGCCTCCTGCTCTTCCTGGTCATGTTCATCTACGCCATCTTTGGAATGTCCAACTTTGCCTATGTTAAAAAGGAAGCCGGAATTGATGACATGTTCAACTTTGAGACCTTTGGCAACAGCATGATCTGCCTGTTCCAAATTACCACCTCTGCGGGCTGGGATGGACTGCTTGCACCTATTCTCAACAGTGCACCACCTGACTGTGACCCTGACACAATCCATCCTGGAAGCTCTGTGAAGGGTGACTGTGGGAACCCATCAGTTGGGATTTTCTTTTTTGTCAGTTACATCATTATTTCCTTTCTAGTGGTGGTGAACATGTACATCGCTGTCATCCTGGAGAACTTCAGCGTTGCCACTGAAGAAAGTGCAGAGCCCCTGAGTGAGGATGACTTTGAGATGTTCTACGAGGTGTGGGAGAAGTTCGATCCTGATGCAACTCAGTTCATAGAGTTTGCAAAGCTCTCTGATTTTGCAGATGCCCTAGATCCCCCTCTTCTCATAGCAAAACCAAACAAAGTCCAGCTCATTGCCATGGACCTGCCCATGGTCAGTGGAGACCGGATCCACTGCCTGGACATCTTATTTGCTTTTACAAAGCGGGTTTTGGGTGAGAGTGGAGAGATGGATGCCCTGCGAATACAGATGGAAGAGCGATTCATGGCATCAAACCCCTCCAAAGTCTCCTATGAGCCCATTACAACCACTTTGAAACGCAAACAAGAGGAGGTGTCTGCTGCTATCATTCAGCGTAATTTCAGATGCTTTCTTTTAAAGCAAAGGTTAAAAAATATAACAAGTAAATATAACAAAGATACAATCAAAGGAAGGATTGATTTACCTATAAAAGATGACATGGTTATTGACAAATTAAATGGAAATTCCACCCCAGAAAAAACAGATGGAAGCTCCTCTACCACCTCTCCTCCTTCTTATGATAGTGTGACAAAACCAGACAAGGAAAAGTTTGAAAAAGACAAAACAGAAAAAGAAAGCAAAGGGAAAGAGGTCAGAGAAAATCAAAAGTAA

Related Sequences

XP_004835897.1 Protein

Scn3a PREDICTED: sodium channel protein type 3 subunit alpha [Heterocephalus glaber]

Length: 2001 aa      View alignments
>XP_004835897.1
MAQALLVPPGPESFHLFTRESLAAIEKHAAEEKAKKPKKEQDNDDENKPKPNSDLEAGKNLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPLNPIRKVAIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSNSAFETNTTTYFNGTMDSNGTFINITMSTFNWKDYIGDDNHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGELLESSSEASKLSSKSAKEWRNRRKKRRQRDHPEGRNSRGEGDRFPKSESEDSVKRRSFLFSMDGNRLTGDKKFCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHSTFEDSESRRDSLFVPPRHGERRNSNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLVGGPSALTSPTGPLQPEGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIASILTNTMEELEESRQKCPPCWYRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINKDCKLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAIGRMQKGIDYVKNKIRECFQKAFFRKPKVLEIHEGNKIDSCMSNNTGIEISKELNYLKDGNGTTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAMGESDFENLNTEEFSSESELEESKEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGKGKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNMTTGNKFEVSDVNNLSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPMYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLSRINLVFIVLFTGEFVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDTIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNFRCFLLKQRLKNITSKYNKDTIKGRIDLPIKDDMVIDKLNGNSTPEKTDGSSSTTSPPSYDSVTKPDKEKFEKDKTEKESKGKEVRENQK