Sequence details NCBI ID: XM_004835114.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ctnnb1
Gene Name catenin (cadherin-associated protein), beta 1, 88kDa, transcript variant X7
Entrez Gene ID 101720578

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTNNB1 ENSCPOG00000002921 (Guinea pig)

Gene Details

catenin (cadherin-associated protein), beta 1, 88kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002653, Guinea pig)

Protein Percentage 99.23%
CDS Percentage 90.87%
Ka/Ks Ratio 0.01077 (Ka = 0.0053, Ks = 0.4947)

CTNNB1 ENSG00000168036 (Human)

Gene Details

catenin (cadherin-associated protein), beta 1, 88kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000344456, Human)

Protein Percentage 99.87%
CDS Percentage 86.04%
Ka/Ks Ratio 0.001 (Ka = 0.0009, Ks = 0.8779)

Ctnnb1 ENSMUSG00000006932 (Mouse)

Gene Details

catenin (cadherin associated protein), beta 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000007130, Mouse)

Protein Percentage 99.74%
CDS Percentage 86.21%
Ka/Ks Ratio 0.00129 (Ka = 0.0012, Ks = 0.9458)

Ctnnb1 ENSRNOG00000019139 (Rat)

Gene Details

catenin (cadherin associated protein), beta 1 (Ctnnb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026016, Rat)

Protein Percentage 99.74%
CDS Percentage 86.94%
Ka/Ks Ratio 0.00133 (Ka = 0.0012, Ks = 0.8989)

Genome Location

Sequence Coding sequence

Length: 2346 bp    Location: 77887258..77876361   Strand: -
Raw sequence   
>XM_004835114.1
ATGGCCACTCAAGCTGACCTGATGGAGCTGGACATGGCCATGGAGCCAGACAGGAAGGCAGCTGTCAGTCACTGGCAGCAGCAGTCGTACCTGGATTCTGGAATCCACTCCGGGGCCACCACCACAGCACCTTCTCTGAGCGGCAAAGGCAACCCCGAGGAGGAGGACGTGGACACCTCCCAGGTCCTGTACGAGTGGGAGCAGGGCTTCTCGCAGTCCTTCACTCAGGAGCAAGTAGCCGACATCGACGGGCAGTACGCGATGACGCGTGCTCAGCGGGTGCGGGCTGCCATGTTCCCGGAGACGCTGGATGAGGGCATGCAGATCCCGTCCACACAGTTCGACGCCGCCCACCCCACCAATGTCCAGCGTTTGGCCGAACCGTCCCAGATGCTGAAACACGCGGTTGTGAACCTGATCAACTACCAGGATGACGCGGAGCTCGCCACACGTGCCATCCCCGAACTCACAAAACTGCTCAATGACGAGGACCAGGTGGTGGTCAACAAGGCTGCGGTGATGGTCCATCAGCTCTCCAAAAAGGAGGCCTCCAGGCACGCCATCATGCGCTCTCCCCAGATGGTGTCCGCCATCGTGCGCACCATGCAGAACACCAGCGACGTGGAGACCGCGCGCTGCACCGCAGGGACCTTGCACAACCTCTCCCACCACCGCGAGGGCCTGCTGGCCATCTTCAAGTCCGGTGGCATCCCTGCGCTGGTGAAAATGCTGGGTTCGCCAGTGGACTCGGTGTTATTTTACGCCATCACAACTCTTCACAACCTTCTGTTACATCAAGAAGGGGCTAAAATGGCAGTGCGTTTAGCTGGCGGCCTGCAGAAAATGGTTGCACTGCTCAATAAAACAAATGTTAAATTCTTGGCTATTACAACAGACTGCCTTCAGATTTTAGCTTATGGCAATCAGGAAAGCAAGCTGATCATCCTGGCCAGTGGTGGGCCCCAGGCTTTAGTGAACATAATGAGGACCTACACCTACGAGAAACTGCTGTGGACCACGAGCAGGGTGCTGAAGGTGCTGTCTGTCTGCTCCAGTAACAAGCCGGCCATCGTGGAGGCTGGTGGGATGCAGGCCTTAGGACTGCACCTGACAGACCCAAGCCAGCGCCTCGTCCAGAACTGTCTCTGGACGCTGAGGAACCTCTCAGACGCCGCGACTAAGCAGGAAGGGATGGAGGGCCTCCTGGGGACGCTTGTGCAGCTGCTGGGCTCTGATGACATCAATGTGGTCACCTGTGCCGCTGGGATCCTCTCCAACCTCACTTGCAATAACTACAAGAACAAGATGATGGTGTGCCAGGTGGGCGGGATTGAGGCTCTGGTACGCACTGTCCTGCGTGCCGGGGACAGGGAGGACATCACCGAGCCGGCCATCTGTGCTCTGCGTCACCTAACCAGCCGACACCAGGAGGCGGAGATGGCCCAGAATGCTGTTCGCCTGCACTATGGCCTCCCAGTCGTGGTTAAGCTCCTGCACCCGCCGTCCCATTGGCCGCTGATCAAGGCTACTGTCGGATTGATTCGCAATCTTGCACTCTGTCCAGCAAATCACGCGCCCTTGCGAGAGCAGGGTGCTATCCCACGCCTGGTCCAGCTGCTTGTGCGCGCGCACCAGGACACCCAGCGCCGCACGTCCATGGGTGGGACGCAGCAGCAGTTCGTGGAGGGCGTCCGCATGGAAGAAATAGTTGAAGGTTGTACCGGAGCCCTGCACATCCTCGCTCGGGATGTTCACAACCGCATCGTCATCCGAGGACTCAATACCATTCCACTGTTCGTGCAGCTGCTCTATTCTCCCATCGAAAACATCCAGAGAGTCGCCGCAGGGGTCCTCTGTGAGCTGGCTCAGGACAAGGAGGCTGCGGAGGCCATTGAGGCGGAGGGGGCCACGGCGCCCCTGACAGAGCTGCTGCACTCGAGGAACGAGGGCGTGGCCACGTACGCGGCCGCCGTGCTGTTCCGGATGTCTGAGGACAAGCCGCAGGACTACAAGAAGCGGCTTTCCGTGGAGCTGACCAGCTCCCTCTTCAGGACAGAGCCCATGGCTTGGAATGAGACCGCTGATCTCGGACTTGATATTGGTGCCCAGGGAGAACCCCTTGGATATCGGCAGGATGACCCCAGCTACCGCTCCTTCCACTCTGGTGGCTACGGCCAGGACGCCTTGGGCATGGACCCCATGATGGAGCACGAGATGGGCGGCCACCACCCTGGTGCCGACTACCCGGTGGATGGGCTGCCGGACCTGGGGCACGCCCAGGACCTCATGGACGGGCTGCCGCCAGGTGACAGCAACCAGCTGGCCTGGTTTGATACTGACCTGTAA

Related Sequences

XP_004835171.1 Protein

Ctnnb1 PREDICTED: catenin beta-1 isoform X7 [Heterocephalus glaber]

Length: 781 aa      View alignments
>XP_004835171.1
MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTSDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADLGLDIGAQGEPLGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMGGHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL